Publications

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2001

McCool JD, Sandler SJ. 2001. Effects of mutations involving cell division, recombination, and chromosome dimer resolution on a priA2::kan mutant.. Proc Natl Acad Sci U S A. 98(15):8203-10.

Sandler SJ, McCool JD, Do TT, Johansen RU. 2001. PriA mutations that affect PriA-PriC function during replication restart.. Mol Microbiol. 41(3):697-704.

Griffith KL, Wolf RE. 2001. Systematic mutagenesis of the DNA binding sites for SoxS in the Escherichia coli zwf and fpr promoters: identifying nucleotides required for DNA binding and transcription activation.. Mol Microbiol. 40(5):1141-54.

2002

Griffith KL, Wolf RE. 2002. A comprehensive alanine scanning mutagenesis of the Escherichia coli transcriptional activator SoxS: identifying amino acids important for DNA binding and transcription activation.. J Mol Biol. 322(2):237-57.

Griffith KL, Shah IM, Myers TE, O'Neill MC, Wolf RE. 2002. Evidence for "pre-recruitment" as a new mechanism of transcription activation in Escherichia coli: the large excess of SoxS binding sites per cell relative to the number of SoxS molecules per cell.. Biochem Biophys Res Commun. 291(4):979-86.

Griffith KL, Wolf RE. 2002. Measuring beta-galactosidase activity in bacteria: cell growth, permeabilization, and enzyme assays in 96-well arrays.. Biochem Biophys Res Commun. 290(1):397-402.

Mukherjee J, Chios K, Fishwild D, Hudson D, O'Donnell S, Rich SM, Donohue-Rolfe A, Tzipori S. 2002. Production and characterization of protective human antibodies against Shiga toxin 1.. Infect Immun. 70(10):5896-9.

2004

Griffith KL, Wolf RE. 2004. Genetic evidence for pre-recruitment as the mechanism of transcription activation by SoxS of Escherichia coli: the dominance of DNA binding mutations of SoxS.. J Mol Biol. 344(1):1-10.

Zhang S, Kolvek S, Goodwin S, Lenz RW. 2004. Poly(hydroxyalkanoic acid) Biosynthesis in Ectothiorhodospirashaposhnikovii: Characterization and Reactivity of a Type III PHA Synthase.. Biomacromolecules. 5(1):40-8.

Griffith KL, Shah IM, Wolf RE. 2004. Proteolytic degradation of Escherichia coli transcription activators SoxS and MarA as the mechanism for reversing the induction of the superoxide (SoxRS) and multiple antibiotic resistance (Mar) regulons.. Mol Microbiol. 51(6):1801-16.

Gov Y, Borovok I, Korem M, Singh VK, Jayaswal RK, Wilkinson BJ, Rich SM, Balaban N. 2004. Quorum sensing in Staphylococci is regulated via phosphorylation of three conserved histidine residues.. J Biol Chem. 279(15):14665-72.

Ilker FM, Nüsslein K, Tew GN, Coughlin BE. 2004. Tuning the hemolytic and antibacterial activities of amphiphilic polynorbornene derivatives.. J Am Chem Soc. 126(48):15870-5.

2005

Griffith KL, Becker SM, Wolf RE. 2005. Characterization of TetD as a transcriptional activator of a subset of genes of the Escherichia coli SoxS/MarA/Rob regulon.. Mol Microbiol. 56(4):1103-17.

Renzette N, Gumlaw N, Nordman JT, Krieger M, Yeh S-P, Long E, Centore R, Boonsombat R, Sandler SJ. 2005. Localization of RecA in Escherichia coli K-12 using RecA-GFP.. Mol Microbiol. 57(4):1074-85.

Sandler SJ. 2005. Requirements for replication restart proteins during constitutive stable DNA replication in Escherichia coli K-12.. Genetics. 169(4):1799-806.

2006

Mahadevan R, Bond DR, Butler JE, Esteve-Nuñez A, Coppi MV, Palsson BO, Schilling CH, Lovley DR. 2006. Characterization of metabolism in the Fe(III)-reducing organism Geobacter sulfurreducens by constraint-based modeling.. Appl Environ Microbiol. 72(2):1558-68.

Yan B, Núñez C, Ueki T, Esteve-Núñez A, Puljic M, Adkins RM, Methé BA, Lovley DR, Krushkal J. 2006. Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information.. Gene. 384:73-95.

Boonsombat R, Yeh S-P, Milne A, Sandler SJ. 2006. A novel dnaC mutation that suppresses priB rep mutant phenotypes in Escherichia coli K-12.. Mol Microbiol. 60(4):973-83.

Daniels R, Rusan NM, Wilbuer A-K, Norkin LC, Wadsworth P, Hebert DN. 2006. Simian virus 40 late proteins possess lytic properties that render them capable of permeabilizing cellular membranes.. J Virol. 80(13):6575-87.

2007

Renzette N, Gumlaw N, Sandler SJ. 2007. DinI and RecX modulate RecA-DNA structures in Escherichia coli K-12.. Mol Microbiol. 63(1):103-15.

Lopper M, Boonsombat R, Sandler SJ, Keck JL. 2007. A hand-off mechanism for primosome assembly in replication restart.. Mol Cell. 26(6):781-93.

2008

Lienkamp K, Madkour AE, Musante A, Nelson CF, Nüsslein K, Tew GN. 2008. Antimicrobial polymers prepared by ROMP with unprecedented selectivity: a molecular construction kit approach.. J Am Chem Soc. 130(30):9836-43.

Tran HT, Krushkal J, Antommattei FM, Lovley DR, Weis RM. 2008. Comparative genomics of Geobacter chemotaxis genes reveals diverse signaling function.. BMC Genomics. 9:471.

Risso C, Methé BA, Elifantz H, Holmes DE, Lovley DR. 2008. Highly conserved genes in Geobacter species with expression patterns indicative of acetate limitation.. Microbiology. 154(Pt 9):2589-99.

Griffith KL, Grossman AD. 2008. Inducible protein degradation in Bacillus subtilis using heterologous peptide tags and adaptor proteins to target substrates to the protease ClpXP.. Mol Microbiol. 70(4):1012-25.

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