Publications
Quantifying expression of Geobacter spp. oxidative stress genes in pure culture and during in situ uranium bioremediation.. ISME J. 3(4):454-65.
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2009. Quantifying expression of Geobacter spp. oxidative stress genes in pure culture and during in situ uranium bioremediation.. ISME J. 3(4):454-65.
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2009. ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids.. Nucleic Acids Res. 38(Web Server issue):W529-33.
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2010. De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads.. PLoS One. 5(6):e10922.
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2010. Genome-wide survey for PilR recognition sites of the metal-reducing prokaryote Geobacter sulfurreducens.. Gene. 469(1-2):31-44.
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2010. Infectious Chlamydia pneumoniae is associated with elevated interleukin-8 and airway neutrophilia in children with refractory asthma.. Pediatr Infect Dis J. 29(12):1093-8.
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2010. Stress-induced synthesis of phosphatidylinositol 3-phosphate in mycobacteria.. J Biol Chem. 285(22):16643-50.
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2010. Bacterial adhesion on hybrid cationic nanoparticle-polymer brush surfaces: ionic strength tunes capture from monovalent to multivalent binding.. Colloids Surf B Biointerfaces. 87(1):109-15.
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2011. Benchmarking a luciferase complementation assay for detecting protein complexes. Nature Methods. 8:990–992.
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2011. Colonization of paediatric lower respiratory tract with genital Mycoplasma species.. Respirology. 16(7):1081-7.
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2011. A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution.. Environ Microbiol. 13(1):13-23.
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2011. Gene expression and deletion analysis of mechanisms for electron transfer from electrodes to Geobacter sulfurreducens.. Bioelectrochemistry. 80(2):142-50.
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2011. In situ to in silico and back: elucidating the physiology and ecology of Geobacter spp. using genome-scale modelling.. Nat Rev Microbiol. 9(1):39-50.
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2011. Production of hydrogen from α-1,4- and β-1,4-linked saccharides by marine hyperthermophilic Archaea.. Appl Environ Microbiol. 77(10):3169-73.
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2011. Proteopedia: a status report on the collaborative, 3D web-encyclopedia of proteins and other biomolecules.. J Struct Biol. 175(2):244-52.
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2011. Biodegradation of ethylene dibromide (1,2-dibromoethane [EDB]) in microcosms simulating in situ and biostimulated conditions.. J Hazard Mater. 209-210:92-8.
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2012. Complete genome sequence of the hyperthermophilic archaeon Pyrococcus sp. strain ST04, isolated from a deep-sea hydrothermal sulfide chimney on the Juan de Fuca Ridge.. J Bacteriol. 194(16):4434-5.
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2012. Complete genome sequence of the hyperthermophilic archaeon Thermococcus sp. strain CL1, isolated from a Paralvinella sp. polychaete worm collected from a hydrothermal vent.. J Bacteriol. 194(17):4769-70.
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2012. Complete genome sequence of the hyperthermophilic archaeon Thermococcus sp. strain CL1, isolated from a Paralvinella sp. polychaete worm collected from a hydrothermal vent.. J Bacteriol. 194(17):4769-70.
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2012. Microbial functional gene diversity with a shift of subsurface redox conditions during In Situ uranium reduction.. Appl Environ Microbiol. 78(8):2966-72.
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2012. Molecular approach to evaluate biostimulation of 1,2-dibromoethane in contaminated groundwater.. Bioresour Technol. 123C:207-213.
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Department of Microbiology