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Garc\'eda-Heredia A, Kado T, Sein CE, Puffal J, Osman SH, Judd J, Gray TA, Morita YS, M Siegrist S.\'a0 2021.\'a0\'a0Membrane-partitioned cell wall synthesis in mycobacteria.. Elife. 10\par \par Tang H-Y, Yang C, Ueki T, Pittman CC, Xu D, Woodard TL, Holmes DE, Gu T, Wang F, Lovley DR.\'a0 2021.\'a0\'a0Stainless steel corrosion via direct iron-to-microbe electron transfer by Geobacter species.. ISME J. 15(10):3084-3093.\par \par Pohane AArunrao, Carr CR, Garhyan J, Swarts BM, M Siegrist S.\'a0 2021.\'a0\'a0Trehalose Recycling Promotes Energy-Efficient Biosynthesis of the Mycobacterial Cell Envelope.. mBio. 12(1)\par \par Kavunja HW, Biegas KJ, Banahene N, Stewart JA, Piligian BF, Groenevelt JM, Sein CE, Morita YS, Niederweis M, M Siegrist S et al..\'a0 2020.\'a0\'a0Photoactivatable Glycolipid Probes for Identifying Mycolate-Protein Interactions in Live Mycobacteria.. J Am Chem Soc. 142(17):7725-7731.\par \par Fiolek TJ, Banahene N, Kavunja HW, Holmes NJ, Rylski AK, Pohane AArunrao, M Siegrist S, Swarts BM.\'a0 2019.\'a0\'a0Engineering the Mycomembrane of Live Mycobacteria with an Expanded Set of Trehalose Monomycolate Analogues.. Chembiochem. 20(10):1282-1291.\par \par Tang H-Y, Holmes DE, Ueki T, Palacios PA, Lovley DR.\'a0 2019.\'a0\'a0Iron Corrosion via Direct Metal-Microbe Electron Transfer.. mBio. 10(3)\par \par Garc\'eda-Heredia A, Pohane AArunrao, Melzer ES, Carr CR, Fiolek TJ, Rundell SR, Lim HChuin, Wagner JC, Morita YS, Swarts BM et al..\'a0 2018.\'a0\'a0Peptidoglycan precursor synthesis along the sidewall of pole-growing mycobacteria. \{eLife\}. 7\par \par Puffal J, Garc\'eda-Heredia A, Rahlwes KC, M Siegrist S, Morita YS.\'a0 2018.\'a0\'a0Spatial control of cell envelope biosynthesis in mycobacteria. Pathogens and Disease. 76\par \par Philips J, Rabaey K, Lovley DR, Vargas M.\'a0 2017.\'a0\'a0Biofilm Formation by Clostridium ljungdahlii Is Induced by Sodium Chloride Stress: Experimental Evaluation and Transcriptome Analysis.. PLoS One. 12(1):e0170406.\par \par Tan Y, Adhikari RY, Malvankar NS, Pi S, Ward JE, Woodard TL, Nevin KP, Xia Q, Tuominen MT, Lovley DR.\'a0 2016.\'a0\'a0Synthetic Biological Protein Nanowires with High Conductivity.. Small. 12(33):4481-5.\par \par Kim Y-T, Jung J-H, Stewart LC, Kwon S-W, Holden JF, Park C-S.\'a0 2015.\'a0\'a0Complete genome sequence of the hyperthermophilic methanogen Methanocaldococcus bathoardescens JH146(T) isolated from the basalt subseafloor.. Mar Genomics. 24 Pt 3:229-30.\par \par M Siegrist S, Aditham AK, Espaillat A, Cameron TA, Whiteside SA, Cava F, Portnoy DA, Bertozzi CR.\'a0 2015.\'a0\'a0Host Actin Polymerization Tunes the Cell Division Cycle of an Intracellular Pathogen.. Cell Rep. \par \par Im J, Prevatte CW, Campagna SR, L\'f6ffler FE.\'a0 2015.\'a0\'a0Identification of 4-Hydroxycumyl Alcohol As the Major MnO2-Mediated Bisphenol A Transformation Product and Evaluation of Its Environmental Fate.. Environ Sci Technol. 49(10):6214-21.\par \par DeAngelis KM, Pold G, Topcuoglu B, van Diepen L, Blanchard J, Melillo J, Frey S.\'a0 2015.\'a0\'a0Long-term warming drives loss of dominant taxa and rRNA copy number among soil bacteria.. Frontiers in Microbiology. \par \par Wang DT, Gruen DS, Lollar BSherwood, Hinrichs K-U, Stewart LC, Holden JF, Hristov AN, Pohlman JW, Morrill PL, K\'f6nneke M et al..\'a0 2015.\'a0\'a0Methane cycling. Nonequilibrium clumped isotope signals in microbial methane.. Science. 348(6233):428-31.\par \par Stewart LC, Jung J-H, Kim Y-T, Kwon S-W, Park C-S, Holden JF.\'a0 2015.\'a0\'a0Methanocaldococcus bathoardescens sp. nov., a hyperthermophilic methanogen isolated from a volcanically active deep-sea hydrothermal vent.. Int J Syst Evol Microbiol. 65(Pt 4):1280-3.\par \par Sang H, Hulvey J, Popko JT, Lopes J, Swaminathan A, Chang T, Jung G.\'a0 2015.\'a0\'a0A pleiotropic drug resistance transporter is involved in reduced sensitivity to multiple fungicide classes in Sclerotinia homoeocarpa (F.T. Bennett).. Mol Plant Pathol. 16(3):251-61.\par \par Im J, Prevatte CW, Lee HGeun, Campagna SR, L\'f6ffler FE.\'a0 2014.\'a0\'a04-methylphenol produced in freshwater sediment microcosms is not a bisphenol A metabolite.. Chemosphere. 117:521-6.\par \par Baek K, Wang M, McKeever R, Rieber K, Park C, N\'fcsslein K.\'a0 2014.\'a0\'a0Biodegradation of low concentrations of 1,2-dibromoethane in groundwater is enhanced by phenol.. Appl Microbiol Biotechnol. 98(3):1329-38.\par \par Jeon E-J, Jung J-H, Seo D-H, Jung D-H, Holden JF, Park C-S.\'a0 2014.\'a0\'a0Bioinformatic and biochemical analysis of a novel maltose-forming ?-amylase of the GH57 family in the hyperthermophilic archaeon Thermococcus sp. CL1.. Enzyme Microb Technol. 60:9-15.\par \par Chen S, Rotaru A-E, Liu F, Philips J, Woodard TL, Nevin KP, Lovley DR.\'a0 2014.\'a0\'a0Carbon cloth stimulates direct interspecies electron transfer in syntrophic co-cultures.. Bioresour Technol. 173:82-86.\par \par Jung J-H, Kim Y-T, Jeon E-J, Seo D-H, Hensley SA, Holden JF, Lee J-H, Park C-S.\'a0 2014.\'a0\'a0Complete genome sequence of hyperthermophilic archaeon Thermococcus sp. ES1.. J Biotechnol. 174C:14-15.\par \par Jung J-H, Seo D-H, Holden JF, Park C-S.\'a0 2014.\'a0\'a0Identification and Characterization of an Archaeal Kojibiose Catabolic Pathway in the Hyperthermophilic Pyrococcus sp. Strain ST04.. J Bacteriol. 196(5):1122-31.\par \par Paula FS, Rodrigues JLM, Zhou J, Wu L, Mueller RC, Mirza BS, Bohannan BJM, N\'fcsslein K, Deng Y, Tiedje JM et al..\'a0 2014.\'a0\'a0Land use change alters functional gene diversity, composition and abundance in Amazon forest soil microbial communities.. Mol Ecol. 23(12):2988-99.\par \par Mueller RC, Paula FS, Mirza BS, Rodrigues JLM, N\'fcsslein K, Bohannan BJM.\'a0 2014.\'a0\'a0Links between plant and fungal communities across a deforestation chronosequence in the Amazon rainforest.. ISME J. 8(7):1548-50.\par \par Jung J-H, Seo D-H, Holden JF, Park C-S.\'a0 2014.\'a0\'a0Maltose-forming ?-amylase from the hyperthermophilic archaeon Pyrococcus sp. ST04.. Appl Microbiol Biotechnol. 98(5):2121-31.\par \par M Siegrist S, Steigedal M, Ahmad R, Mehra A, Dragset MS, Schuster BM, Philips JA, Carr SA, Rubin EJ.\'a0 2014.\'a0\'a0Mycobacterial Esx-3 requires multiple components for iron acquisition.. MBio. 5(3):e01073-14.\par \par Sha K, Choi S-H, Im J, Lee GG, Loeffler F, Park JH.\'a0 2014.\'a0\'a0Regulation of ethanol-related behavior and ethanol metabolism by the Corazonin neurons and Corazonin receptor in Drosophila melanogaster.. PLoS One. 9(1):e87062.\par \par Mirza BS, Potisap C, N\'fcsslein K, Bohannan BJM, Rodrigues JLM.\'a0 2014.\'a0\'a0Response of free-living nitrogen-fixing microorganisms to land use change in the Amazon rainforest.. Appl Environ Microbiol. 80(1):281-8.\par \par Park K-H, Jung J-H, Park S-G, Lee M-E, Holden JF, Park C-S, Woo E-J.\'a0 2014.\'a0\'a0Structural features underlying the selective cleavage of a novel exo-type maltose-forming amylase from Pyrococcus sp. ST04.. Acta Crystallogr D Biol Crystallogr. 70(Pt 6):1659-68.\par \par Hensley SA, Jung J-H, Park C-S, Holden JF.\'a0 2014.\'a0\'a0Thermococcus paralvinellae sp. nov. and Thermococcus cleftensis sp. nov. of hyperthermophilic heterotrophs from deep-sea hydrothermal vents.. Int J Syst Evol Microbiol. 64(Pt 11):3655-9.\par \par Vargas M, Malvankar NS, Tremblay P-L, Leang C, Smith JA, Patel P, Snoeyenbos-West O, Nevin KP, Lovley DR.\'a0 2013.\'a0\'a0Aromatic amino acids required for pili conductivity and long-range extracellular electron transport in Geobacter sulfurreducens.. mBio. 4(2):e00105-13.\par \par Nagarajan H, Embree M, Rotaru A-E, Shrestha PM, Feist AM, Palsson B\'d8, Lovley DR, Zengler K.\'a0 2013.\'a0\'a0Characterization and modelling of interspecies electron transfer mechanisms and microbial community dynamics of a syntrophic association.. Nat Commun. 4:2809.\par \par Qiu Y, Nagarajan H, Embree M, Shieu W, Abate E, Ju\'e1rez K, Cho B-K, Elkins JG, Nevin KP, Barrett CL et al..\'a0 2013.\'a0\'a0Characterizing the interplay between multiple levels of organization within bacterial sigma factor regulatory networks.. Nat Commun. 4:1755.\par \par Rodrigues JLM, Pellizari VH, Mueller R, Baek K, Jesus Eda C, Paula FS, Mirza B, Hamaoui GS, Tsai SMui, Feigl B et al..\'a0 2013.\'a0\'a0Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities.. Proc Natl Acad Sci U S A. 110(3):988-93.\par \par Lee J-E, Kim I-H, Jung J-H, Seo D-H, Kang S-G, Holden JF, Cha J, Park C-S.\'a0 2013.\'a0\'a0Molecular cloning and enzymatic characterization of cyclomaltodextrinase from hyperthermophilic archaeon Thermococcus sp. CL1.. J Microbiol Biotechnol. 23(8):1060-9.\par \par Hatzios SK, Baer CE, Rustad TR, M Siegrist S, Pang JM, Ortega C, Alber T, Grundner C, Sherman DR, Bertozzi CR.\'a0 2013.\'a0\'a0Osmosensory signaling in Mycobacterium tuberculosis mediated by a eukaryotic-like Ser/Thr protein kinase.. Proc Natl Acad Sci U S A. 110(52):E5069-77.\par \par Pold G, DeAngelis KM.\'a0 2013.\'a0\'a0Up against the wall: the effects of climate warming on soil microbial diversity and the potential for feedbacks to the carbon cycle.. Diversity. 5(2):409-425.\par \par McKeever R, Sheppard D, N\'fcsslein K, Baek K-H, Rieber K, Ergas SJ, Forbes R, Hilyard M, Park C.\'a0 2012.\'a0\'a0Biodegradation of ethylene dibromide (1,2-dibromoethane [EDB]) in microcosms simulating in situ and biostimulated conditions.. J Hazard Mater. 209-210:92-8.\par \par Jung J-H, Lee J-H, Holden JF, Seo D-H, Shin H, Kim H-Y, Kim W, Ryu S, Park C-S.\'a0 2012.\'a0\'a0Complete genome sequence of the hyperthermophilic archaeon Pyrococcus sp. strain ST04, isolated from a deep-sea hydrothermal sulfide chimney on the Juan de Fuca Ridge.. J Bacteriol. 194(16):4434-5.\par \par Jung J-H, Holden JF, Seo D-H, Park K-H, Shin H, Ryu S, Lee J-H, Park C-S.\'a0 2012.\'a0\'a0Complete genome sequence of the hyperthermophilic archaeon Thermococcus sp. strain CL1, isolated from a Paralvinella sp. polychaete worm collected from a hydrothermal vent.. J Bacteriol. 194(17):4769-70.\par \par Liang Y, Van Nostrand JD, N'guessan LA, Peacock AD, Deng Y, Long PE, Resch TC, Wu L, He Z, Li G et al..\'a0 2012.\'a0\'a0Microbial functional gene diversity with a shift of subsurface redox conditions during In Situ uranium reduction.. Appl Environ Microbiol. 78(8):2966-72.\par \par Baek K, McKeever R, Rieber K, Sheppard D, Park C, Ergas SJ, N\'fcsslein K.\'a0 2012.\'a0\'a0Molecular approach to evaluate biostimulation of 1,2-dibromoethane in contaminated groundwater.. Bioresour Technol. 123C:207-213.\par \par Patel KK, Anderson EA, Salva PS, Webley WC.\'a0 2012.\'a0\'a0The prevalence and identity of Chlamydia-specific IgE in children with asthma and other chronic respiratory symptoms.. Respir Res. 13(1):32.\par \par Unal B, Perry V R, Sheth M, Gomez-Alvarez V, Chin K-J, N\'fcsslein K.\'a0 2012.\'a0\'a0Trace elements affect methanogenic activity and diversity in enrichments from subsurface coal bed produced water.. Front Microbiol. 3:175.\par \par Fang B, Gon S, Park M-H, Kumar K-N, Rotello VM, N\'fcsslein K, Santore MM.\'a0 2012.\'a0\'a0Using flow to switch the valency of bacterial capture on engineered surfaces containing immobilized nanoparticles.. Langmuir. 28(20):7803-10.\par \par Fang B, Gon S, Park M, Kumar K-N, Rotello VM, Nusslein K, Santore MM.\'a0 2011.\'a0\'a0Bacterial adhesion on hybrid cationic nanoparticle-polymer brush surfaces: ionic strength tunes capture from monovalent to multivalent binding.. Colloids Surf B Biointerfaces. 87(1):109-15.\par \par Cassonnet P, Rolloy C, Neveu G, Vidalain P-O, Chantier T, Pellet J, Jones L, Muller M, Demeret C, Gaud G et al..\'a0 2011.\'a0\'a0Benchmarking a luciferase complementation assay for detecting protein complexes. Nature Methods. 8:990?992.\par \par Patel KK, Salva PS, Webley WC.\'a0 2011.\'a0\'a0Colonization of paediatric lower respiratory tract with genital Mycoplasma species.. Respirology. 16(7):1081-7.\par \par Tremblay P-L, Summers ZM, Glaven RH, Nevin KP, Zengler K, Barrett CL, Qiu Y, Palsson BO, Lovley DR.\'a0 2011.\'a0\'a0A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution.. Environ Microbiol. 13(1):13-23.\par \par Strycharz SM, Glaven RH, Coppi MV, Gannon SM, Perpetua LA, Liu A, Nevin KP, Lovley DR.\'a0 2011.\'a0\'a0Gene expression and deletion analysis of mechanisms for electron transfer from electrodes to Geobacter sulfurreducens.. Bioelectrochemistry. 80(2):142-50.\par \par Mahadevan R, Palsson B\'d8, Lovley DR.\'a0 2011.\'a0\'a0In situ to in silico and back: elucidating the physiology and ecology of Geobacter spp. using genome-scale modelling.. Nat Rev Microbiol. 9(1):39-50.\par \par Oslowski DM, Jung J-H, Seo D-H, Park C-S, Holden JF.\'a0 2011.\'a0\'a0Production of hydrogen from ?-1,4- and ?-1,4-linked saccharides by marine hyperthermophilic Archaea.. Appl Environ Microbiol. 77(10):3169-73.\par \par Prilusky J, Hodis E, Canner D, Decatur WA, Oberholser K, Martz E, Berchanski A, Harel M, Sussman JL.\'a0 2011.\'a0\'a0Proteopedia: a status report on the collaborative, 3D web-encyclopedia of proteins and other biomolecules.. J Struct Biol. 175(2):244-52.\par \par Ashkenazy H, Erez E, Martz E, Pupko T, Ben-Tal N.\'a0 2010.\'a0\'a0ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids.. Nucleic Acids Res. 38(Web Server issue):W529-33.\par \par Nagarajan H, Butler JE, Klimes A, Qiu Y, Zengler K, Ward J, Young ND, Meth\'e9 BA, Palsson B\'d8, Lovley DR et al..\'a0 2010.\'a0\'a0De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads.. PLoS One. 5(6):e10922.\par \par Krushkal J, Ju\'e1rez K, Barbe JF, Qu Y, Andrade A, Puljic M, Adkins RM, Lovley DR, Ueki T.\'a0 2010.\'a0\'a0Genome-wide survey for PilR recognition sites of the metal-reducing prokaryote Geobacter sulfurreducens.. Gene. 469(1-2):31-44.\par \par Patel KK, Vicencio AG, Du Z, Tsirilakis K, Salva PS, Webley WC.\'a0 2010.\'a0\'a0Infectious Chlamydia pneumoniae is associated with elevated interleukin-8 and airway neutrophilia in children with refractory asthma.. Pediatr Infect Dis J. 29(12):1093-8.\par \par Morita YS, Yamaryo-Botte Y, Miyanagi K, Callaghan JM, Patterson JH, Crellin PK, Coppel RL, Billman-Jacobe H, Kinoshita T, McConville MJ.\'a0 2010.\'a0\'a0Stress-induced synthesis of phosphatidylinositol 3-phosphate in mycobacteria.. J Biol Chem. 285(22):16643-50.\par \par Krushkal J, Leang C, Barbe JF, Qu Y, Yan B, Puljic M, Adkins RM, Lovley DR.\'a0 2009.\'a0\'a0Diversity of promoter elements in a Geobacter sulfurreducens mutant adapted to disruption in electron transfer.. Funct Integr Genomics. 9(1):15-25.\par \par Rubinstein ND, Mayrose I, Martz E, Pupko T.\'a0 2009.\'a0\'a0Epitopia: a web-server for predicting B-cell epitopes.. BMC Bioinformatics. 10:287.\par \par Junglen S, Kurth A, Kuehl H, Quan P-L, Ellerbrok H, Pauli G, Nitsche A, Nunn C, Rich SM, Lipkin WI et al..\'a0 2009.\'a0\'a0Examining landscape factors influencing relative distribution of mosquito genera and frequency of virus infection.. Ecohealth. 6(2):239-49.\par \par Sun J, Sayyar B, Butler JE, Pharkya P, Fahland TR, Famili I, Schilling CH, Lovley DR, Mahadevan R.\'a0 2009.\'a0\'a0Genome-scale constraint-based modeling of Geobacter metallireducens.. BMC Syst Biol. 3:15.\par \par Leang C, Krushkal J, Ueki T, Puljic M, Sun J, Ju\'e1rez K, N\'fa\'f1ez C, Reguera G, DiDonato R, Postier B et al..\'a0 2009.\'a0\'a0Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens.. BMC Genomics. 10:331.\par \par Qu Y, Brown P, Barbe JF, Puljic M, Merino E, Adkins RM, Lovley DR, Krushkal J.\'a0 2009.\'a0\'a0GSEL version 2, an online genome-wide query system of operon organization and regulatory sequence elements of Geobacter sulfurreducens.. OMICS. 13(5):439-49.\par \par Abd-Alla AMM, Vlak JM, Bergoin M, Maruniak JE, Parker A, Burand JP, Jehle JA, Boucias DG.\'a0 2009.\'a0\'a0Hytrosaviridae: a proposal for classification and nomenclature of a new insect virus family.. Arch Virol. 154(6):909-18.\par \par Webley WC, Tilahun Y, Lay K, Patel K, Stuart ES, Andrzejewski C, Salva PS.\'a0 2009.\'a0\'a0Occurrence of Chlamydia trachomatis and Chlamydia pneumoniae in paediatric respiratory infections.. Eur Respir J. 33(2):360-7.\par \par Rich SM, Leendertz FH, Xu G, LeBreton M, Djoko CF, Aminake MN, Takang EE, Diffo JLD, Pike BL, Rosenthal BM et al..\'a0 2009.\'a0\'a0The origin of malignant malaria.. Proc Natl Acad Sci U S A. 106(35):14902-7.\par \par Hedrick DB, Peacock AD, Lovley DR, Woodard TL, Nevin KP, Long PE, White DC.\'a0 2009.\'a0\'a0Polar lipid fatty acids, LPS-hydroxy fatty acids, and respiratory quinones of three Geobacter strains, and variation with electron acceptor.. J Ind Microbiol Biotechnol. 36(2):205-9.\par \par Mouser PJ, Holmes DE, Perpetua LA, DiDonato R, Postier B, Liu A, Lovley DR.\'a0 2009.\'a0\'a0Quantifying expression of Geobacter spp. oxidative stress genes in pure culture and during in situ uranium bioremediation.. ISME J. 3(4):454-65.\par \par Holmes DE, O'Neil RA, Chavan MA, N'guessan LA, Vrionis HA, Perpetua LA, Larrahondo JM, DiDonato R, Liu A, Lovley DR.\'a0 2009.\'a0\'a0Transcriptome of Geobacter uraniireducens growing in uranium-contaminated subsurface sediments.. ISME J. 3(2):216-30.\par \par Garcia-Maruniak A, Abd-Alla AMM, Salem TZ, Parker AG, Lietze V-U, van Oers MM, Maruniak JE, Kim W, Burand JP, Cousserans F et al..\'a0 2009.\'a0\'a0Two viruses that cause salivary gland hypertrophy in Glossina pallidipes and Musca domestica are related and form a distinct phylogenetic clade.. J Gen Virol. 90(Pt 2):334-46.\par \par Postier B, DiDonato R, Nevin KP, Liu A, Frank B, Lovley D, Methe BA.\'a0 2008.\'a0\'a0Benefits of in-situ synthesized microarrays for analysis of gene expression in understudied microorganisms.. J Microbiol Methods. 74(1):26-32.\par \par Mahadevan R, Yan B, Postier B, Nevin KP, Woodard TL, O'Neil R, Coppi MV, Meth\'e9 BA, Krushkal J.\'a0 2008.\'a0\'a0Characterizing regulation of metabolism in Geobacter sulfurreducens through genome-wide expression data and sequence analysis.. OMICS. 12(1):33-59.\par \par Holmes DE, Mester T, O'Neil RA, Perpetua LA, Larrahondo JM, Glaven R, Sharma ML, Ward JE, Nevin KP, Lovley DR.\'a0 2008.\'a0\'a0Genes for two multicopper proteins required for Fe(III) oxide reduction in Geobacter sulfurreducens have different expression patterns both in the subsurface and on energy-harvesting electrodes.. Microbiology. 154(Pt 5):1422-35.\par \par Haveman SA, Didonato RJ, Villanueva L, Shelobolina ES, Postier BL, Xu B, Liu A, Lovley DR.\'a0 2008.\'a0\'a0Genome-wide gene expression patterns and growth requirements suggest that Pelobacter carbinolicus reduces Fe(III) indirectly via sulfide production.. Appl Environ Microbiol. 74(14):4277-84.\par \par Izallalen M, Mahadevan R, Burgard A, Postier B, DiDonato R, Sun J, Schilling CH, Lovley DR.\'a0 2008.\'a0\'a0Geobacter sulfurreducens strain engineered for increased rates of respiration.. Metab Eng. 10(5):267-75.\par \par Kim B-C, Postier BL, Didonato RJ, Chaudhuri SK, Nevin KP, Lovley DR.\'a0 2008.\'a0\'a0Insights into genes involved in electricity generation in Geobacter sulfurreducens via whole genome microarray analysis of the OmcF-deficient mutant.. Bioelectrochemistry. 73(1):70-5.\par \par Hodis E, Prilusky J, Martz E, Silman I, Moult J, Sussman JL.\'a0 2008.\'a0\'a0Proteopedia - a scientific 'wiki' bridging the rift between three-dimensional structure and function of biomacromolecules.. Genome Biol. 9(8):R121.\par \par Krushkal J, Yan B, DiDonato LN, Puljic M, Nevin KP, Woodard TL, Adkins RM, Meth\'e9 BA, Lovley DR.\'a0 2007.\'a0\'a0Genome-wide expression profiling in Geobacter sulfurreducens: identification of Fur and RpoS transcription regulatory sites in a relGsu mutant.. Funct Integr Genomics. 7(3):229-55.\par \par Shelobolina ES, Nevin KP, Blakeney-Hayward JD, Johnsen CV, Plaia TW, Krader P, Woodard T, Holmes DE, Vanpraagh C G, Lovley DR.\'a0 2007.\'a0\'a0Geobacter pickeringii sp. nov., Geobacter argillaceus sp. nov. and Pelosinus fermentans gen. nov., sp. nov., isolated from subsurface kaolin lenses.. Int J Syst Evol Microbiol. 57(Pt 1):126-35.\par \par Figaji AA, Fieggen AG, Sandler SJI, Argent AC, Le Roux PD, Peter JC.\'a0 2007.\'a0\'a0Intracranial pressure and cerebral oxygenation changes after decompressive craniectomy in a child with traumatic brain swelling.. Childs Nerv Syst. 23(11):1331-5.\par \par Mayrose I, Penn O, Erez E, Rubinstein ND, Shlomi T, Freund N T, Bublil EM, Ruppin E, Sharan R, Gershoni JM et al..\'a0 2007.\'a0\'a0Pepitope: epitope mapping from affinity-selected peptides.. Bioinformatics. 23(23):3244-6.\par \par Reguera G, Pollina RB, Nicoll JS, Lovley DR.\'a0 2007.\'a0\'a0Possible nonconductive role of Geobacter sulfurreducens pilus nanowires in biofilm formation.. J Bacteriol. 189(5):2125-7.\par \par Holmes DE, Nevin KP, Woodard TL, Peacock AD, Lovley DR.\'a0 2007.\'a0\'a0Prolixibacter bellariivorans gen. nov., sp. nov., a sugar-fermenting, psychrotolerant anaerobe of the phylum Bacteroidetes, isolated from a marine-sediment fuel cell.. Int J Syst Evol Microbiol. 57(Pt 4):701-7.\par \par Waldron PJ, Petsch ST, Martini AM, N\'fcsslein K, N\'fcslein K.\'a0 2007.\'a0\'a0Salinity constraints on subsurface archaeal diversity and methanogenesis in sedimentary rock rich in organic matter.. Appl Environ Microbiol. 73(13):4171-9.\par \par Stern A, Doron-Faigenboim A, Erez E, Martz E, Bacharach E, Pupko T.\'a0 2007.\'a0\'a0Selecton 2007: advanced models for detecting positive and purifying selection using a Bayesian inference approach.. Nucleic Acids Res. 35(Web Server issue):W506-11.\par \par Mahadevan R, Bond DR, Butler JE, Esteve-Nu\'f1ez A, Coppi MV, Palsson BO, Schilling CH, Lovley DR.\'a0 2006.\'a0\'a0Characterization of metabolism in the Fe(III)-reducing organism Geobacter sulfurreducens by constraint-based modeling.. Appl Environ Microbiol. 72(2):1558-68.\par \par Yan B, N\'fa\'f1ez C, Ueki T, Esteve-N\'fa\'f1ez A, Puljic M, Adkins RM, Meth\'e9 BA, Lovley DR, Krushkal J.\'a0 2006.\'a0\'a0Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information.. Gene. 384:73-95.\par \par Lowy DA, Tender LM, Zeikus GJ, Park D H, Lovley DR.\'a0 2006.\'a0\'a0Harvesting energy from the marine sediment-water interface II. Kinetic activity of anode materials.. Biosens Bioelectron. 21(11):2058-63.\par \par Kovacevic S, Anderson D, Morita YS, Patterson J, Haites R, McMillan BNI, Coppel R, McConville MJ, Billman-Jacobe H.\'a0 2006.\'a0\'a0Identification of a novel protein with a role in lipoarabinomannan biosynthesis in mycobacteria.. 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Environ Sci Technol. 39(23):9039-48.\par \par Vrionis HA, Anderson RT, Ortiz-Bernad I, O'Neill KR, Resch CT, Peacock AD, Dayvault R, White DC, Long PE, Lovley DR.\'a0 2005.\'a0\'a0Microbiological and geochemical heterogeneity in an in situ uranium bioremediation field site.. Appl Environ Microbiol. 71(10):6308-18.\par \par de la Salmoni\'e8re Y-OLuc Goguet, Kim CC, Tsolaki AG, Pym AS, Siegrist MS, Small PM.\'a0 2004.\'a0\'a0High-throughput method for detecting genomic-deletion polymorphisms.. J Clin Microbiol. 42(7):2913-8.\par \par McCool JD, Long E, Petrosino JF, Sandler HA, Rosenberg SM, Sandler SJ.\'a0 2004.\'a0\'a0Measurement of SOS expression in individual Escherichia coli K-12 cells using fluorescence microscopy.. Mol Microbiol. 53(5):1343-57.\par \par Glaser F, Pupko T, Paz I, Bell RE, Bechor-Shental D, Martz E, Ben-Tal N.\'a0 2003.\'a0\'a0ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic information.. 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Nat Biotechnol. 20(8):821-5.\par \par Holden JF, Poole Ii FL, Tollaksen SL, Giometti CS, Lim H, Yates Iii JR, Adams MW.\'a0 2001.\'a0\'a0Identification of membrane proteins in the hyperthermophilic archaeon pyrococcus furiosus using proteomics and prediction programs.. Comp Funct Genomics. 2(5):275-88.\par \par Adams MW, Holden JF, Menon AL, Schut GJ, Grunden AM, Hou C, Hutchins AM, Jenney FE, Kim C, Ma K et al..\'a0 2001.\'a0\'a0Key role for sulfur in peptide metabolism and in regulation of three hydrogenases in the hyperthermophilic archaeon Pyrococcus furiosus.. J Bacteriol. 183(2):716-24.\par \par Bazylinski DA, Dean AJ, Sch\'fcler D, Phillips EJ, Lovley DR.\'a0 2000.\'a0\'a0N2-dependent growth and nitrogenase activity in the metal-metabolizing bacteria, Geobacter and Magnetospirillum species.. Environ Microbiol. 2(3):266-73.\par \par Sandler SJ, Hugenholtz P, Schleper C, DeLong EF, Pace NR, Clark AJ.\'a0 1999.\'a0\'a0Diversity of radA genes from cultured and uncultured archaea: comparative analysis of putative RadA proteins and their use as a phylogenetic marker.. J Bacteriol. 181(3):907-15.\par \par Sandler SJ, Marians KJ, Zavitz KH, Coutu J, Parent MA, Clark AJ.\'a0 1999.\'a0\'a0dnaC mutations suppress defects in DNA replication- and recombination-associated functions in priB and priC double mutants in Escherichia coli K-12.. Mol Microbiol. 34(1):91-101.\par \par Quinteros R, Goodwin S, Lenz RW, Park WH.\'a0 1999.\'a0\'a0Extracellular degradation of medium chain length poly(beta-hydroxyalkanoates) by Comamonas sp.. Int J Biol Macromol. 25(1-3):135-43.\par \par Coates JD, Woodward J, Allen J, Philp P, Lovley DR.\'a0 1997.\'a0\'a0Anaerobic degradation of polycyclic aromatic hydrocarbons and alkanes in petroleum-contaminated marine harbor sediments.. Appl Environ Microbiol. 63(9):3589-93.\par \par Coates JD, Phillips EJ, Lonergan DJ, Jenter H, Lovley DR.\'a0 1996.\'a0\'a0Isolation of Geobacter species from diverse sedimentary environments.. Appl Environ Microbiol. 62(5):1531-6.\par \par Lonergan DJ, Jenter HL, Coates JD, Phillips EJ, Schmidt TM, Lovley DR.\'a0 1996.\'a0\'a0Phylogenetic analysis of dissimilatory Fe(III)-reducing bacteria.. J Bacteriol. 178(8):2402-8.\par \par Lovley DR, Coates JD, Woodward JC, Phillips E.\'a0 1995.\'a0\'a0Benzene oxidation coupled to sulfate reduction.. Appl Environ Microbiol. 61(3):953-8.\par \par Coates JD, Lonergan DJ, Philips EJ, Jenter H, Lovley DR.\'a0 1995.\'a0\'a0Desulfuromonas palmitatis sp. nov., a marine dissimilatory Fe(III) reducer that can oxidize long-chain fatty acids.. Arch Microbiol. 164(6):406-13.\par \par Lovley DR, Phillips EJ, Lonergan DJ, Widman PK.\'a0 1995.\'a0\'a0Fe(III) and S0 reduction by Pelobacter carbinolicus.. Appl Environ Microbiol. 61(6):2132-8.\par \par Laverman AM, Blum JS, Schaefer JK, Phillips E, Lovley DR, Oremland RS.\'a0 1995.\'a0\'a0Growth of Strain SES-3 with Arsenate and Other Diverse Electron Acceptors.. Appl Environ Microbiol. 61(10):3556-61.\par \par Lovley DR, Phillips EJ.\'a0 1994.\'a0\'a0Novel processes for anaerobic sulfate production from elemental sulfur by sulfate-reducing bacteria.. Appl Environ Microbiol. 60(7):2394-9.\par \par Lovley DR, Phillips EJ.\'a0 1994.\'a0\'a0Reduction of Chromate by Desulfovibrio vulgaris and Its c(3) Cytochrome.. Appl Environ Microbiol. 60(2):726-8.\par \par Phillips EJ, Lovley DR, Roden EE.\'a0 1993.\'a0\'a0Composition of Non-Microbially Reducible Fe(III) in Aquatic Sediments.. Appl Environ Microbiol. 59(8):2727-9.\par \par Lovley DR, Giovannoni SJ, White DC, Champine JE, Phillips EJ, Gorby YA, Goodwin S.\'a0 1993.\'a0\'a0Geobacter metallireducens gen. nov. sp. nov., a microorganism capable of coupling the complete oxidation of organic compounds to the reduction of iron and other metals.. Arch Microbiol. 159(4):336-44.\par \par Smith RP, Rand PW, Lacombe EH, Telford SR, Rich SM, Piesman J, Spielman A.\'a0 1993.\'a0\'a0Norway rats as reservoir hosts for Lyme disease spirochetes on Monhegan Island, Maine.. J Infect Dis. 168(3):687-91.\par \par Lovley DR, Widman PK, Woodward JC, Phillips EJ.\'a0 1993.\'a0\'a0Reduction of uranium by cytochrome c3 of Desulfovibrio vulgaris.. Appl Environ Microbiol. 59(11):3572-6.\par \par Lovley DR, Phillips EJ, Caccavo F.\'a0 1992.\'a0\'a0Acetate oxidation by dissimilatory Fe(III) reducers.. Appl Environ Microbiol. 58(9):3205-8.\par \par Lovley DR, Phillips EJ.\'a0 1992.\'a0\'a0Reduction of uranium by Desulfovibrio desulfuricans.. Appl Environ Microbiol. 58(3):850-6.\par \par Lovley DR, Phillips EJ, Lonergan DJ.\'a0 1989.\'a0\'a0Hydrogen and Formate Oxidation Coupled to Dissimilatory Reduction of Iron or Manganese by Alteromonas putrefaciens.. Appl Environ Microbiol. 55(3):700-6.\par \par Lovley DR, Phillips EJ.\'a0 1989.\'a0\'a0Requirement for a Microbial Consortium To Completely Oxidize Glucose in Fe(III)-Reducing Sediments.. Appl Environ Microbiol. 55(12):3234-6.\par \par Lovley DR, Phillips EJ.\'a0 1988.\'a0\'a0Novel mode of microbial energy metabolism: organic carbon oxidation coupled to dissimilatory reduction of iron or manganese.. Appl Environ Microbiol. 54(6):1472-80.\par \par Lovley DR, Phillips EJ.\'a0 1987.\'a0\'a0Competitive mechanisms for inhibition of sulfate reduction and methane production in the zone of ferric iron reduction in sediments.. 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