Publications

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2011
Lovley DR, Ueki T, Zhang T, Malvankar NS, Shrestha PM, Flanagan KA, Aklujkar M, Butler JE, Giloteaux L, Rotaru A-E et al..  2011.  Geobacter: the microbe electric's physiology, ecology, and practical applications.. Adv Microb Physiol. 59:1-100.
Nakatani F, Morita YS, Ashida H, Nagamune K, Maeda Y, Kinoshita T.  2011.  Identification of a second catalytically active trans-sialidase in Trypanosoma brucei.. Biochem Biophys Res Commun. 415(2):421-5.
Nakatani F, Morita YS, Ashida H, Nagamune K, Maeda Y, Kinoshita T.  2011.  Identification of a second catalytically active trans-sialidase in Trypanosoma brucei.. Biochem Biophys Res Commun. 415(2):421-5.
Mahadevan R, Palsson BØ, Lovley DR.  2011.  In situ to in silico and back: elucidating the physiology and ecology of Geobacter spp. using genome-scale modelling.. Nat Rev Microbiol. 9(1):39-50.
Morita YS, Fukuda T, Sena CBC, Yamaryo-Botte Y, McConville MJ, Kinoshita T.  2011.  Inositol lipid metabolism in mycobacteria: biosynthesis and regulatory mechanisms.. Biochim Biophys Acta. 1810(6):630-41.
Morita YS, Fukuda T, Sena CBC, Yamaryo-Botte Y, McConville MJ, Kinoshita T.  2011.  Inositol lipid metabolism in mycobacteria: biosynthesis and regulatory mechanisms.. Biochim Biophys Acta. 1810(6):630-41.
Mackelprang R, Waldrop MP, Deangelis KM, David MM, Chavarria KL, Blazewicz SJ, Rubin EM, Jansson JK.  2011.  Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw.. Nature. 480(7377):368-71.
Miletto M, Williams KH, N'Guessan AL, Lovley DR.  2011.  Molecular analysis of the metabolic rates of discrete subsurface populations of sulfate reducers.. Appl Environ Microbiol. 77(18):6502-9.
Yun J, Ueki T, Miletto M, Lovley DR.  2011.  Monitoring the metabolic status of geobacter species in contaminated groundwater by quantifying key metabolic proteins with Geobacter-specific antibodies.. Appl Environ Microbiol. 77(13):4597-602.
Prilusky J, Hodis E, Canner D, Decatur WA, Oberholser K, Martz E, Berchanski A, Harel M, Sussman JL.  2011.  Proteopedia: a status report on the collaborative, 3D web-encyclopedia of proteins and other biomolecules.. J Struct Biol. 175(2):244-52.
Marceau AH, Bahng S, Massoni SC, George NP, Sandler SJ, Marians KJ, Keck JL.  2011.  Structure of the SSB-DNA polymerase III interface and its role in DNA replication.. EMBO J. 30(20):4236-47.
Marceau AH, Bahng S, Massoni SC, George NP, Sandler SJ, Marians KJ, Keck JL.  2011.  Structure of the SSB-DNA polymerase III interface and its role in DNA replication.. EMBO J. 30(20):4236-47.
Marceau AH, Bahng S, Massoni SC, George NP, Sandler SJ, Marians KJ, Keck JL.  2011.  Structure of the SSB-DNA polymerase III interface and its role in DNA replication.. EMBO J. 30(20):4236-47.
Johne R, Buck CB, Allander T, Atwood WJ, Garcea RL, Imperiale MJ, Major EO, Ramqvist T, Norkin LC.  2011.  Taxonomical developments in the family Polyomaviridae.. Arch Virol. 156(9):1627-34.
Malvankar NS, Vargas M, Nevin KP, Franks AE, Leang C, Kim B-C, Inoue K, Mester T, Covalla SF, Johnson JP et al..  2011.  Tunable metallic-like conductivity in microbial nanowire networks.. Nat Nanotechnol. 6(9):573-9.
Malvankar NS, Vargas M, Nevin KP, Franks AE, Leang C, Kim B-C, Inoue K, Mester T, Covalla SF, Johnson JP et al..  2011.  Tunable metallic-like conductivity in microbial nanowire networks.. Nat Nanotechnol. 6(9):573-9.
2010
Leang C, Qian X, Mester T, Lovley DR.  2010.  Alignment of the c-type cytochrome OmcS along pili of Geobacter sulfurreducens.. Appl Environ Microbiol. 76(12):4080-4.
Callister SJ, Wilkins MJ, Nicora CD, Williams KH, Banfield JF, VerBerkmoes NC, Hettich RL, N'Guessan L, Mouser PJ, Elifantz H et al..  2010.  Analysis of biostimulated microbial communities from two field experiments reveals temporal and spatial differences in proteome profiles.. Environ Sci Technol. 44(23):8897-903.
Ashkenazy H, Erez E, Martz E, Pupko T, Ben-Tal N.  2010.  ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids.. Nucleic Acids Res. 38(Web Server issue):W529-33.
Sena CBC, Fukuda T, Miyanagi K, Matsumoto S, Kobayashi K, Murakami Y, Maeda Y, Kinoshita T, Morita YS.  2010.  Controlled expression of branch-forming mannosyltransferase is critical for mycobacterial lipoarabinomannan biosynthesis.. J Biol Chem. 285(18):13326-36.
Sena CBC, Fukuda T, Miyanagi K, Matsumoto S, Kobayashi K, Murakami Y, Maeda Y, Kinoshita T, Morita YS.  2010.  Controlled expression of branch-forming mannosyltransferase is critical for mycobacterial lipoarabinomannan biosynthesis.. J Biol Chem. 285(18):13326-36.
Sena CBC, Fukuda T, Miyanagi K, Matsumoto S, Kobayashi K, Murakami Y, Maeda Y, Kinoshita T, Morita YS.  2010.  Controlled expression of branch-forming mannosyltransferase is critical for mycobacterial lipoarabinomannan biosynthesis.. J Biol Chem. 285(18):13326-36.
Sena CBC, Fukuda T, Miyanagi K, Matsumoto S, Kobayashi K, Murakami Y, Maeda Y, Kinoshita T, Morita YS.  2010.  Controlled expression of branch-forming mannosyltransferase is critical for mycobacterial lipoarabinomannan biosynthesis.. J Biol Chem. 285(18):13326-36.
Sena CBC, Fukuda T, Miyanagi K, Matsumoto S, Kobayashi K, Murakami Y, Maeda Y, Kinoshita T, Morita YS.  2010.  Controlled expression of branch-forming mannosyltransferase is critical for mycobacterial lipoarabinomannan biosynthesis.. J Biol Chem. 285(18):13326-36.
Nagarajan H, Butler JE, Klimes A, Qiu Y, Zengler K, Ward J, Young ND, Methé BA, Palsson BØ, Lovley DR et al..  2010.  De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads.. PLoS One. 5(6):e10922.

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