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Yan B, Núñez C, Ueki T, Esteve-Núñez A, Puljic M, Adkins RM, Methé BA, Lovley DR, Krushkal J.  2006.  Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information.. Gene. 384:73-95.
Sun Y-L, Tang H-Y, Ribbe A, Duzhko V, Woodard TL, Ward JE, Bai Y, Nevin KP, Nonnenmann SS, Russell T et al..  2018.  Conductive Composite Materials Fabricated from Microbially Produced Protein Nanowires.. Small. 14(44):e1802624.
Feist AM, Nagarajan H, Rotaru A-E, Tremblay P-L, Zhang T, Nevin KP, Lovley DR, Zengler K.  2014.  Constraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducens.. PLoS Comput Biol. 10(4):e1003575.
Scheibe TD, Mahadevan R, Fang Y, Garg S, Long PE, Lovley DR.  2009.  Coupling a genome-scale metabolic model with a reactive transport model to describe in situ uranium bioremediation.. Microb Biotechnol. 2(2):274-86.
Filman DJ, Marino SF, Ward JE, Yang L, Mester Z, Bullitt E, Lovley DR, Strauss M.  2019.  Cryo-EM reveals the structural basis of long-range electron transport in a cytochrome-based bacterial nanowire.. Commun Biol. 2:219.
Tremblay P-L, Summers ZM, Glaven RH, Nevin KP, Zengler K, Barrett CL, Qiu Y, Palsson BO, Lovley DR.  2011.  A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution.. Environ Microbiol. 13(1):13-23.
D
Nagarajan H, Butler JE, Klimes A, Qiu Y, Zengler K, Ward J, Young ND, Methé BA, Palsson BØ, Lovley DR et al..  2010.  De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads.. PLoS One. 5(6):e10922.
Wilkins MJ, Callister SJ, Miletto M, Williams KH, Nicora CD, Lovley DR, Long PE, Lipton MS.  2011.  Development of a biomarker for Geobacter activity and strain composition; proteogenomic analysis of the citrate synthase protein during bioremediation of U(VI).. Microb Biotechnol. 4(1):55-63.
Khare T, Esteve-Núñez A, Nevin KP, Zhu W, Yates JR, Lovley D, Giometti CS.  2006.  Differential protein expression in the metal-reducing bacterium Geobacter sulfurreducens strain PCA grown with fumarate or ferric citrate.. Proteomics. 6(2):632-40.
Chin K-J, Esteve-Núñez A, Leang C, Lovley DR.  2004.  Direct correlation between rates of anaerobic respiration and levels of mRNA for key respiratory genes in Geobacter sulfurreducens.. Appl Environ Microbiol. 70(9):5183-9.
Fang Y, Scheibe TD, Mahadevan R, Garg S, Long PE, Lovley DR.  2011.  Direct coupling of a genome-scale microbial in silico model and a groundwater reactive transport model.. J Contam Hydrol. 122(1-4):96-103.
Summers ZM, Fogarty HE, Leang C, Franks AE, Malvankar NS, Lovley DR.  2010.  Direct exchange of electrons within aggregates of an evolved syntrophic coculture of anaerobic bacteria.. Science. 330(6009):1413-5.
Rotaru A-E, Shrestha PMalla, Liu F, Markovaite B, Chen S, Nevin KP, Lovley DR.  2014.  Direct interspecies electron transfer between Geobacter metallireducens and Methanosarcina barkeri.. Appl Environ Microbiol. 80(15):4599-605.
Liu X, Walker DJF, Nonnenmann SS, Sun D, Lovley DR.  2021.  Direct Observation of Electrically Conductive Pili Emanating from .. mBio. 12(4):e0220921.
Lovley DR, Holmes DE, Nevin KP.  2004.  Dissimilatory Fe(III) and Mn(IV) reduction.. Adv Microb Physiol. 49:219-86.
Cummings DE, Snoeyenbos-West OL, Newby DT, Niggemyer AM, Lovley DR, Achenbach LA, Rosenzweig RF.  2003.  Diversity of Geobacteraceae species inhabiting metal-polluted freshwater lake sediments ascertained by 16S rDNA analyses.. Microb Ecol. 46(2):257-69.
Krushkal J, Leang C, Barbe JF, Qu Y, Yan B, Puljic M, Adkins RM, Lovley DR.  2009.  Diversity of promoter elements in a Geobacter sulfurreducens mutant adapted to disruption in electron transfer.. Funct Integr Genomics. 9(1):15-25.
Methé BA, Webster J, Nevin K, Butler J, Lovley DR.  2005.  DNA microarray analysis of nitrogen fixation and Fe(III) reduction in Geobacter sulfurreducens.. Appl Environ Microbiol. 71(5):2530-8.
Núñez C, Esteve-Núñez A, Giometti C, Tollaksen S, Khare T, Lin W, Lovley DR, Methé BA.  2006.  DNA microarray and proteomic analyses of the RpoS regulon in Geobacter sulfurreducens.. J Bacteriol. 188(8):2792-800.
Shanmugam R, Aklujkar M, Schäfer M, Reinhardt R, Nickel O, Reuter G, Lovley DR, Ehrenhofer-Murray A, Nellen W, Ankri S et al..  2014.  The Dnmt2 RNA methyltransferase homolog of Geobacter sulfurreducens specifically methylates tRNA-Glu.. Nucleic Acids Res. 42(10):6487-96.

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