Publications

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Filters: Keyword is Acetates [Clear All Filters]

2021

Zhou J, Holmes DE, Tang H-Y, Lovley DR. 2021. Correlation of Key Physiological Properties of Isolates with Environment of Origin.. Appl Environ Microbiol. 87(13):e0073121.

2019

Holmes DE, Ueki T, Tang H-Y, Zhou J, Smith JA, Chaput G, Lovley DR. 2019. A Membrane-Bound Cytochrome Enables To Conserve Energy from Extracellular Electron Transfer.. mBio. 10(4)

2018

Holmes DE, Orelana R, Giloteaux L, Wang L-Y, Shrestha P, Williams K, Lovley DR, Rotaru A-E. 2018. Potential for Methanosarcina to Contribute to Uranium Reduction during Acetate-Promoted Groundwater Bioremediation.. Microb Ecol. 76(3):660-667.

2016

Ueki T, Nevin KP, Woodard TL, Lovley DR. 2016. Genetic switches and related tools for controlling gene expression and electrical outputs of Geobacter sulfurreducens.. J Ind Microbiol Biotechnol. 43(11):1561-1575.

Zhao Z, Zhang Y, Holmes DE, Dang Y, Woodard TL, Nevin KP, Lovley DR. 2016. Potential enhancement of direct interspecies electron transfer for syntrophic metabolism of propionate and butyrate with biochar in up-flow anaerobic sludge blanket reactors.. Bioresour Technol. 209:148-56.

2013

Giloteaux L, Holmes DE, Williams KH, Wrighton KC, Wilkins MJ, Montgomery AP, Smith JA, Orellana R, Thompson CA, Roper TJ et al.. 2013. Characterization and transcription of arsenic respiration and resistance genes during in situ uranium bioremediation.. ISME J. 7(2):370-83.

Nagarajan H, Sahin M, Nogales J, Latif H, Lovley DR, Ebrahim A, Zengler K. 2013. Characterizing acetogenic metabolism using a genome-scale metabolic reconstruction of Clostridium ljungdahlii.. Microb Cell Fact. 12:118.

Holmes DE, Giloteaux L, Williams KH, Wrighton KC, Wilkins MJ, Thompson CA, Roper TJ, Long PE, Lovley DR. 2013. Enrichment of specific protozoan populations during in situ bioremediation of uranium-contaminated groundwater.. ISME J. 7(7):1286-98.

Williams KH, Wilkins MJ, A N'Guessan L, Arey B, Dodova E, Dohnalkova A, Holmes D, Lovley DR, Long PE. 2013. Field evidence of selenium bioreduction in a uranium-contaminated aquifer.. Environ Microbiol Rep. 5(3):444-52.

Holmes DE, Giloteaux L, Barlett M, Chavan MA, Smith JA, Williams KH, Wilkins M, Long P, Lovley DR. 2013. Molecular analysis of the in situ growth rates of subsurface Geobacter species.. Appl Environ Microbiol. 79(5):1646-53.

Shrestha PMalla, Rotaru A-E, Aklujkar M, Liu F, Shrestha M, Summers ZM, Malvankar N, Flores DCarlo, Lovley DR. 2013. Syntrophic growth with direct interspecies electron transfer as the primary mechanism for energy exchange.. Environ Microbiol Rep. 5(6):904-10.

Shrestha PMalla, Rotaru A-E, Summers ZM, Shrestha M, Liu F, Lovley DR. 2013. Transcriptomic and genetic analysis of direct interspecies electron transfer.. Appl Environ Microbiol. 79(7):2397-404.

2012

Holmes DE, Risso C, Smith JA, Lovley DR. 2012. Genome-scale analysis of anaerobic benzoate and phenol metabolism in the hyperthermophilic archaeon Ferroglobus placidus.. ISME J. 6(1):146-57.

2011

Zhuang K, Izallalen M, Mouser P, Richter H, Risso C, Mahadevan R, Lovley DR. 2011. Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in anoxic subsurface environments.. ISME J. 5(2):305-16.

Yun J, Ueki T, Miletto M, Lovley DR. 2011. Monitoring the metabolic status of geobacter species in contaminated groundwater by quantifying key metabolic proteins with Geobacter-specific antibodies.. Appl Environ Microbiol. 77(13):4597-602.

2010

Butler JE, Young ND, Lovley DR. 2010. Evolution of electron transfer out of the cell: comparative genomics of six Geobacter genomes.. BMC Genomics. 11:40.

Elifantz H, N'guessan LA, Mouser PJ, Williams KH, Wilkins MJ, Risso C, Holmes DE, Long PE, Lovley DR. 2010. Expression of acetate permease-like (apl ) genes in subsurface communities of Geobacter species under fluctuating acetate concentrations.. FEMS Microbiol Ecol. 73(3):441-9.

2009

Scheibe TD, Mahadevan R, Fang Y, Garg S, Long PE, Lovley DR. 2009. Coupling a genome-scale metabolic model with a reactive transport model to describe in situ uranium bioremediation.. Microb Biotechnol. 2(2):274-86.

2008

Holmes DE, Mester T, O'Neil RA, Perpetua LA, Larrahondo JM, Glaven R, Sharma ML, Ward JE, Nevin KP, Lovley DR. 2008. Genes for two multicopper proteins required for Fe(III) oxide reduction in Geobacter sulfurreducens have different expression patterns both in the subsurface and on energy-harvesting electrodes.. Microbiology. 154(Pt 5):1422-35.

Risso C, Methé BA, Elifantz H, Holmes DE, Lovley DR. 2008. Highly conserved genes in Geobacter species with expression patterns indicative of acetate limitation.. Microbiology. 154(Pt 9):2589-99.

N'guessan LA, Vrionis HA, Resch CT, Long PE, Lovley DR. 2008. Sustained removal of uranium from contaminated groundwater following stimulation of dissimilatory metal reduction.. Environ Sci Technol. 42(8):2999-3004.

2007

Coppi MV, O'Neil RA, Leang C, Kaufmann F, Methé BA, Nevin KP, Woodard TL, Liu A, Lovley DR. 2007. Involvement of Geobacter sulfurreducens SfrAB in acetate metabolism rather than intracellular, respiration-linked Fe(III) citrate reduction.. Microbiology. 153(Pt 10):3572-85.

2006

Reguera G, Nevin KP, Nicoll JS, Covalla SF, Woodard TL, Lovley DR. 2006. Biofilm and nanowire production leads to increased current in Geobacter sulfurreducens fuel cells.. Appl Environ Microbiol. 72(11):7345-8.

Hu Y, Holden JF. 2006. Citric acid cycle in the hyperthermophilic archaeon Pyrobaculum islandicum grown autotrophically, heterotrophically, and mixotrophically with acetate.. J Bacteriol. 188(12):4350-5.

2005

Bond DR, Lovley DR. 2005. Evidence for involvement of an electron shuttle in electricity generation by Geothrix fermentans.. Appl Environ Microbiol. 71(4):2186-9.

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