Publications

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2013
Williams KH, Wilkins MJ, A N'Guessan L, Arey B, Dodova E, Dohnalkova A, Holmes D, Lovley DR, Long PE.  2013.  Field evidence of selenium bioreduction in a uranium-contaminated aquifer.. Environ Microbiol Rep. 5(3):444-52.
Wilkins MJ, Wrighton KC, Nicora CD, Williams KH, McCue LAnn, Handley KM, Miller CS, Giloteaux L, Montgomery AP, Lovley DR et al..  2013.  Fluctuations in species-level protein expression occur during element and nutrient cycling in the subsurface.. PLoS One. 8(3):e57819.
Leang C, Ueki T, Nevin KP, Lovley DR.  2013.  A genetic system for Clostridium ljungdahlii: a chassis for autotrophic production of biocommodities and a model homoacetogen.. Appl Environ Microbiol. 79(4):1102-9.
Vriezen JAC, de Bruijn FJ, Nüsslein K.  2013.  Identification and characterization of a NaCl-responsive genetic locus involved in survival during desiccation in Sinorhizobium meliloti.. Appl Environ Microbiol. 79(18):5693-700.
Nie H, Zhang T, Cui M, Lu H, Lovley DR, Russell TP.  2013.  Improved cathode for high efficient microbial-catalyzed reduction in microbial electrosynthesis cells.. Phys Chem Chem Phys. 15(34):14290-4.
Shrestha PMalla, Nevin KP, Shrestha M, Lovley DR.  2013.  When is a microbial culture "pure"? Persistent cryptic contaminant escapes detection even with deep genome sequencing. mBio. 4(2):e00591-12.
2014
Baek K, Wang M, McKeever R, Rieber K, Park C, Nüsslein K.  2014.  Biodegradation of low concentrations of 1,2-dibromoethane in groundwater is enhanced by phenol.. Appl Microbiol Biotechnol. 98(3):1329-38.
Chen S, Rotaru A-E, Liu F, Philips J, Woodard TL, Nevin KP, Lovley DR.  2014.  Carbon cloth stimulates direct interspecies electron transfer in syntrophic co-cultures.. Bioresour Technol. 173:82-86.
Feist AM, Nagarajan H, Rotaru A-E, Tremblay P-L, Zhang T, Nevin KP, Lovley DR, Zengler K.  2014.  Constraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducens.. PLoS Comput Biol. 10(4):e1003575.
Feist AM, Nagarajan H, Rotaru A-E, Tremblay P-L, Zhang T, Nevin KP, Lovley DR, Zengler K.  2014.  Constraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducens.. PLoS Comput Biol. 10(4):e1003575.
Ueki T, Nevin KP, Woodard TL, Lovley DR.  2014.  Converting carbon dioxide to butyrate with an engineered strain of Clostridium ljungdahlii.. mBio. 5(5):e01636-14.
Shrestha PMalla, Malvankar NS, Werner JJ, Franks AE, Elena-Rotaru A, Shrestha M, Liu F, Nevin KP, Angenent LT, Lovley DR.  2014.  Correlation between microbial community and granule conductivity in anaerobic bioreactors for brewery wastewater treatment.. Bioresour Technol. 174:306-10.
Rotaru A-E, Shrestha PMalla, Liu F, Markovaite B, Chen S, Nevin KP, Lovley DR.  2014.  Direct interspecies electron transfer between Geobacter metallireducens and Methanosarcina barkeri.. Appl Environ Microbiol. 80(15):4599-605.
Shanmugam R, Aklujkar M, Schäfer M, Reinhardt R, Nickel O, Reuter G, Lovley DR, Ehrenhofer-Murray A, Nellen W, Ankri S et al..  2014.  The Dnmt2 RNA methyltransferase homolog of Geobacter sulfurreducens specifically methylates tRNA-Glu.. Nucleic Acids Res. 42(10):6487-96.
Shanmugam R, Aklujkar M, Schäfer M, Reinhardt R, Nickel O, Reuter G, Lovley DR, Ehrenhofer-Murray A, Nellen W, Ankri S et al..  2014.  The Dnmt2 RNA methyltransferase homolog of Geobacter sulfurreducens specifically methylates tRNA-Glu.. Nucleic Acids Res. 42(10):6487-96.
Fang B, Jiang Y, Rotello VM, Nüsslein K, Santore MM.  2014.  Easy come easy go: surfaces containing immobilized nanoparticles or isolated polycation chains facilitate removal of captured Staphylococcus aureus by retarding bacterial bond maturation.. ACS Nano. 8(2):1180-90.
Liu X, Tremblay P-L, Malvankar NS, Nevin KP, Lovley DR, Vargas M.  2014.  A Geobacter sulfurreducens strain expressing pseudomonas aeruginosa type IV pili localizes OmcS on pili but is deficient in Fe(III) oxide reduction and current production.. Appl Environ Microbiol. 80(3):1219-24.
Smith JA, Tremblay P-L, Shrestha PMalla, Snoeyenbos-West OL, Franks AE, Nevin KP, Lovley DR.  2014.  Going wireless: Fe(III) oxide reduction without pili by Geobacter sulfurreducens strain JS-1.. Appl Environ Microbiol. 80(14):4331-40.
Banerjee A, Leang C, Ueki T, Nevin KP, Lovley DR.  2014.  Lactose-inducible system for metabolic engineering of Clostridium ljungdahlii.. Appl Environ Microbiol. 80(8):2410-6.
Paula FS, Rodrigues JLM, Zhou J, Wu L, Mueller RC, Mirza BS, Bohannan BJM, Nüsslein K, Deng Y, Tiedje JM et al..  2014.  Land use change alters functional gene diversity, composition and abundance in Amazon forest soil microbial communities.. Mol Ecol. 23(12):2988-99.
Mueller RC, Paula FS, Mirza BS, Rodrigues JLM, Nüsslein K, Bohannan BJM.  2014.  Links between plant and fungal communities across a deforestation chronosequence in the Amazon rainforest.. ISME J. 8(7):1548-50.
Chen S, Rotaru A-E, Shrestha PMalla, Malvankar NS, Liu F, Fan W, Nevin KP, Lovley DR.  2014.  Promoting interspecies electron transfer with biochar.. Sci Rep. 4:5019.
Wardman C, Nevin KP, Lovley DR.  2014.  Real-time monitoring of subsurface microbial metabolism with graphite electrodes.. Front Microbiol. 5:621.
Mirza BS, Potisap C, Nüsslein K, Bohannan BJM, Rodrigues JLM.  2014.  Response of free-living nitrogen-fixing microorganisms to land use change in the Amazon rainforest.. Appl Environ Microbiol. 80(1):281-8.
Zhang T, Bain TS, Barlett MA, Dar SA, Snoeyenbos-West OL, Nevin KP, Lovley DR.  2014.  Sulfur oxidation to sulfate coupled with electron transfer to electrodes by Desulfuromonas strain TZ1.. Microbiology (Reading). 160(Pt 1):123-129.

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