Publications

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Martz E.  2002.  Protein Explorer: easy yet powerful macromolecular visualization.. Trends Biochem Sci. 27(2):107-9.
Lovley DR, Walker DJF.  2019.   Protein Nanowires.. Front Microbiol. 10:2078.
Lovley DR, Holmes DE.  2020.  Protein Nanowires: the Electrification of the Microbial World and Maybe Our Own.. J Bacteriol. 202(20)
Wilkins MJ, VerBerkmoes NC, Williams KH, Callister SJ, Mouser PJ, Elifantz H, N'guessan LA, Thomas BC, Nicora CD, Shah MB et al..  2009.  Proteogenomic monitoring of Geobacter physiology during stimulated uranium bioremediation.. Appl Environ Microbiol. 75(20):6591-9.
Griffith KL, Shah IM, Wolf RE.  2004.  Proteolytic degradation of Escherichia coli transcription activators SoxS and MarA as the mechanism for reversing the induction of the superoxide (SoxRS) and multiple antibiotic resistance (Mar) regulons.. Mol Microbiol. 51(6):1801-16.
Ding Y-HR, Hixson KK, Giometti CS, Stanley A, Esteve-Núñez A, Khare T, Tollaksen SL, Zhu W, Adkins JN, Lipton MS et al..  2006.  The proteome of dissimilatory metal-reducing microorganism Geobacter sulfurreducens under various growth conditions.. Biochim Biophys Acta. 1764(7):1198-206.
Ding Y-HR, Hixson KK, Aklujkar MA, Lipton MS, Smith RD, Lovley DR, Mester T.  2008.  Proteome of Geobacter sulfurreducens grown with Fe(III) oxide or Fe(III) citrate as the electron acceptor.. Biochim Biophys Acta. 1784(12):1935-41.
Orellana R, Hixson KK, Murphy S, Mester T, Sharma ML, Lipton MS, Lovley DR.  2014.  Proteome of Geobacter sulfurreducens in the presence of U(VI).. Microbiology (Reading). 160(Pt 12):2607-2617.
Hodis E, Prilusky J, Martz E, Silman I, Moult J, Sussman JL.  2008.  Proteopedia - a scientific 'wiki' bridging the rift between three-dimensional structure and function of biomacromolecules.. Genome Biol. 9(8):R121.
Prilusky J, Hodis E, Canner D, Decatur WA, Oberholser K, Martz E, Berchanski A, Harel M, Sussman JL.  2011.  Proteopedia: a status report on the collaborative, 3D web-encyclopedia of proteins and other biomolecules.. J Struct Biol. 175(2):244-52.
Martz E.  2009.  Proteopedia.Org: a scientific "Wiki" bridging the rift between 3D structure and function of biomacromolecules.. Biopolymers. 92(1):76-7.
Holmes DE, Nevin KP, Snoeyenbos-West OL, Woodard TL, Strickland JN, Lovley DR.  2015.  Protozoan grazing reduces the current output of microbial fuel cells.. Bioresour Technol. 193:8-14.
Kuznetsov ON, Litsov AN.  1973.  [Psychoneurological problems of human adaptation to changed daily schedules].. Kosm Biol Med. 7(4):69-75.
Inoue K, Qian X, Morgado L, Kim B-C, Mester T, Izallalen M, Salgueiro CA, Lovley DR.  2010.  Purification and characterization of OmcZ, an outer-surface, octaheme c-type cytochrome essential for optimal current production by Geobacter sulfurreducens.. Appl Environ Microbiol. 76(12):3999-4007.
Mehta T, Childers SE, Glaven R, Lovley DR, Mester T.  2006.  A putative multicopper protein secreted by an atypical type II secretion system involved in the reduction of insoluble electron acceptors in Geobacter sulfurreducens.. Microbiology. 152(Pt 8):2257-64.
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Villanueva L, Haveman SA, Summers ZM, Lovley DR.  2008.  Quantification of Desulfovibrio vulgaris dissimilatory sulfite reductase gene expression during electron donor- and electron acceptor-limited growth.. Appl Environ Microbiol. 74(18):5850-3.
Chin K-J, Sharma ML, Russell LA, O'Neill KR, Lovley DR.  2008.  Quantifying expression of a dissimilatory (bi)sulfite reductase gene in petroleum-contaminated marine harbor sediments.. Microb Ecol. 55(3):489-99.
Mouser PJ, Holmes DE, Perpetua LA, DiDonato R, Postier B, Liu A, Lovley DR.  2009.  Quantifying expression of Geobacter spp. oxidative stress genes in pure culture and during in situ uranium bioremediation.. ISME J. 3(4):454-65.
Gov Y, Borovok I, Korem M, Singh VK, Jayaswal RK, Wilkinson BJ, Rich SM, Balaban N.  2004.  Quorum sensing in Staphylococci is regulated via phosphorylation of three conserved histidine residues.. J Biol Chem. 279(15):14665-72.
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Seitz EM, Brockman JP, Sandler SJ, Clark AJ, Kowalczykowski SC.  1998.  RadA protein is an archaeal RecA protein homolog that catalyzes DNA strand exchange.. Genes Dev. 12(9):1248-53.
Lovley DR, Woodward JC, Chapelle FH.  1996.  Rapid Anaerobic Benzene Oxidation with a Variety of Chelated Fe(III) Forms.. Appl Environ Microbiol. 62(1):288-91.
Lovley DR, Phillips EJ.  1987.  Rapid assay for microbially reducible ferric iron in aquatic sediments.. Appl Environ Microbiol. 53(7):1536-40.
Weiner JM, Lovley DR.  1998.  Rapid Benzene Degradation in Methanogenic Sediments from a Petroleum-Contaminated Aquifer. Appl Environ Microbiol. 64(5):1937-9.
Chapelle FH, Bradley PM, Lovley DR, O'Neill K, Landmeyer JE.  2002.  Rapid evolution of redox processes in a petroleum hydrocarbon-contaminated aquifer.. Ground Water. 40(4):353-60.
Lovley DR, Greening RC, Ferry JG.  1984.  Rapidly growing rumen methanogenic organism that synthesizes coenzyme M and has a high affinity for formate.. Appl Environ Microbiol. 48(1):81-7.

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