Publications

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2013

Shetty A, Swaminathan A, Lopes JM. 2013. Transcription regulation of a yeast gene from a downstream location.. J Mol Biol. 425(3):457-65.

Shrestha PMalla, Rotaru A-E, Summers ZM, Shrestha M, Liu F, Lovley DR. 2013. Transcriptomic and genetic analysis of direct interspecies electron transfer.. Appl Environ Microbiol. 79(7):2397-404.

Benmerzouga I, Concepción-Acevedo J, Kim H-S, Vandoros AV, Cross GAM, Klingbeil MM, Li B. 2013. Trypanosoma brucei Orc1 is essential for nuclear DNA replication and affects both VSG silencing and VSG switching.. Mol Microbiol. 87(1):196-210.

Pold G, DeAngelis KM. 2013. Up against the wall: the effects of climate warming on soil microbial diversity and the potential for feedbacks to the carbon cycle.. Diversity. 5(2):409-425.

Orellana R, Leavitt JJ, Comolli LR, Csencsits R, Janot N, Flanagan KA, Gray AS, Leang C, Izallalen M, Mester T et al.. 2013. U(VI) reduction by diverse outer surface c-type cytochromes of Geobacter sulfurreducens.. Appl Environ Microbiol. 79(20):6369-74.

Shrestha PMalla, Nevin KP, Shrestha M, Lovley DR. 2013. When is a microbial culture "pure"? Persistent cryptic contaminant escapes detection even with deep genome sequencing. mBio. 4(2):e00591-12.

2012

Zhang T, Bain TS, Nevin KP, Barlett MA, Lovley DR. 2012. Anaerobic benzene oxidation by Geobacter species.. Appl Environ Microbiol. 78(23):8304-10.

Deangelis KM, Fortney JL, Borglin S, Silver WL, Simmons BA, Hazen TC. 2012. Anaerobic decomposition of switchgrass by tropical soil-derived feedstock-adapted consortia.. MBio. 3(1)

Burand JP, Kim W, Afonso CL, Tulman ER, Kutish GF, Lu Z, Rock DL. 2012. Analysis of the genome of the sexually transmitted insect virus Helicoverpa zea nudivirus 2.. Viruses. 4(1):28-61.

Borglin S, Joyner D, Deangelis KM, Khudyakov J, D'haeseleer P, Joachimiak MP, Hazen T. 2012. Application of phenotypic microarrays to environmental microbiology.. Curr Opin Biotechnol. 23(1):41-8.

McKeever R, Sheppard D, Nüsslein K, Baek K-H, Rieber K, Ergas SJ, Forbes R, Hilyard M, Park C. 2012. Biodegradation of ethylene dibromide (1,2-dibromoethane [EDB]) in microcosms simulating in situ and biostimulated conditions.. J Hazard Mater. 209-210:92-8.

Neveu G, Cassonnet P, Vidalain P-O, Rolloy C, Mendoza J, Jones L, Tangy F, Muller M, Demeret C, Tafforeau L et al.. 2012. Comparative analysis of virus–host interactomes with a mammalian high-throughput protein complementation assay based on Gaussia princeps luciferase. Methods. 58:349–359.

Butler JE, Young ND, Aklujkar M, Lovley DR. 2012. Comparative genomic analysis of Geobacter sulfurreducens KN400, a strain with enhanced capacity for extracellular electron transfer and electricity production.. BMC Genomics. 13:471.

Jung J-H, Lee J-H, Holden JF, Seo D-H, Shin H, Kim H-Y, Kim W, Ryu S, Park C-S. 2012. Complete genome sequence of the hyperthermophilic archaeon Pyrococcus sp. strain ST04, isolated from a deep-sea hydrothermal sulfide chimney on the Juan de Fuca Ridge.. J Bacteriol. 194(16):4434-5.

Jung J-H, Holden JF, Seo D-H, Park K-H, Shin H, Ryu S, Lee J-H, Park C-S. 2012. Complete genome sequence of the hyperthermophilic archaeon Thermococcus sp. strain CL1, isolated from a Paralvinella sp. polychaete worm collected from a hydrothermal vent.. J Bacteriol. 194(17):4769-70.

Vriezen J A, de Bruijn FJ, Nüsslein KR. 2012. Desiccation induces viable but Non-Culturable cells in Sinorhizobium meliloti 1021.. AMB Express. 2(1):6.

Zhuang K, Ma E, Lovley DR, Mahadevan R. 2012. The design of long-term effective uranium bioremediation strategy using a community metabolic model.. Biotechnol Bioeng. 109(10):2475-83.

Kuksin D, Norkin LC. 2012. Disassembly of simian virus 40 during passage through the endoplasmic reticulum and in the cytoplasm.. J Virol. 86(3):1555-62.

Kuksin D, Norkin LC. 2012. Disassociation of the SV40 Genome from Capsid Proteins Prior to Nuclear Entry.. Virol J. 9(1):158.

Concepción-Acevedo J, Luo J, Klingbeil MM. 2012. Dynamic localization of Trypanosoma brucei mitochondrial DNA polymerase ID.. Eukaryot Cell. 11(7):844-55.

Malvankar NS, Lau J, Nevin KP, Franks AE, Tuominen MT, Lovley DR. 2012. Electrical conductivity in a mixed-species biofilm.. Appl Environ Microbiol. 78(16):5967-71.

Lovley DR. 2012. Electromicrobiology.. Annu Rev Microbiol.

Massoni SC, Leeson MC, Long J E, Gemme K, Mui A, Sandler SJ. 2012. Factors Limiting SOS Expression in Log-Phase Cells of Escherichia coli.. J Bacteriol. 194(19):5325-33.

Blanco M B, Elfawal MA, Durden LA, Beati L, Xu G, Godfrey LR, Rich SM. 2012. Genetic diversity of ixodid ticks parasitizing eastern mouse and dwarf lemurs in Madagascar, with descriptions of the larva, nymph and male of Ixodes lemuris (Acari: Ixodidae).. J Parasitol.

Aklujkar M, Haveman SA, DiDonato R, Chertkov O, Han CS, Land ML, Brown P, Lovley DR. 2012. The genome of Pelobacter carbinolicus reveals surprising metabolic capabilities and physiological features.. BMC Genomics. 13:690.

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