Publications
Methanocaldococcus bathoardescens sp. nov., a hyperthermophilic methanogen isolated from a volcanically active deep-sea hydrothermal vent.. Int J Syst Evol Microbiol. 65(Pt 4):1280-3.
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2015. Correlation between microbial community and granule conductivity in anaerobic bioreactors for brewery wastewater treatment.. Bioresour Technol. 174:306-10.
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2014. Going wireless: Fe(III) oxide reduction without pili by Geobacter sulfurreducens strain JS-1.. Appl Environ Microbiol. 80(14):4331-40.
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2014. Response of free-living nitrogen-fixing microorganisms to land use change in the Amazon rainforest.. Appl Environ Microbiol. 80(1):281-8.
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2014. Sulfur oxidation to sulfate coupled with electron transfer to electrodes by Desulfuromonas strain TZ1.. Microbiology (Reading). 160(Pt 1):123-129.
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2014. Thermococcus paralvinellae sp. nov. and Thermococcus cleftensis sp. nov. of hyperthermophilic heterotrophs from deep-sea hydrothermal vents.. Int J Syst Evol Microbiol. 64(Pt 11):3655-9.
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2014. Molecular analysis of the in situ growth rates of subsurface Geobacter species.. Appl Environ Microbiol. 79(5):1646-53.
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2013. Anaerobic benzene oxidation by Geobacter species.. Appl Environ Microbiol. 78(23):8304-10.
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2012. Complete genome sequence of the hyperthermophilic archaeon Pyrococcus sp. strain ST04, isolated from a deep-sea hydrothermal sulfide chimney on the Juan de Fuca Ridge.. J Bacteriol. 194(16):4434-5.
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2012. Complete genome sequence of the hyperthermophilic archaeon Thermococcus sp. strain CL1, isolated from a Paralvinella sp. polychaete worm collected from a hydrothermal vent.. J Bacteriol. 194(17):4769-70.
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2012. The genome of Pelobacter carbinolicus reveals surprising metabolic capabilities and physiological features.. BMC Genomics. 13:690.
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2012. Performance of a pilot-scale packed bed reactor for perchlorate reduction using a sulfur oxidizing bacterial consortium.. Biotechnol Bioeng. 109(3):637-46.
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2012. Characterization of trapped lignin-degrading microbes in tropical forest soil.. PLoS One. 6(4):e19306.
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2011. A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution.. Environ Microbiol. 13(1):13-23.
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2011. Molecular analysis of the metabolic rates of discrete subsurface populations of sulfate reducers.. Appl Environ Microbiol. 77(18):6502-9.
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2010.
Bacterial diversity analysis of Huanglongbing pathogen-infected citrus, using PhyloChip arrays and 16S rRNA gene clone library sequencing.. Appl Environ Microbiol. 75(6):1566-74.
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2009. Evolution from a respiratory ancestor to fill syntrophic and fermentative niches: comparative fenomics of six Geobacteraceae species.. BMC Genomics. 10:103.
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2009. The genome sequence of Geobacter metallireducens: features of metabolism, physiology and regulation common and dissimilar to Geobacter sulfurreducens.. BMC Microbiol. 9:109.
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2009. Genome-scale comparison and constraint-based metabolic reconstruction of the facultative anaerobic Fe(III)-reducer Rhodoferax ferrireducens.. BMC Genomics. 10:447.
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2009. Hydrogenotrophic denitrification and perchlorate reduction in ion exchange brines using membrane biofilm reactors.. Biotechnol Bioeng. 104(3):483-91.
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2009. Characterizing regulation of metabolism in Geobacter sulfurreducens through genome-wide expression data and sequence analysis.. OMICS. 12(1):33-59.
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2008. A degenerate tripartite DNA-binding site required for activation of ComA-dependent quorum response gene expression in Bacillus subtilis.. J Mol Biol. 381(2):261-75.
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2008. Geobacter uraniireducens sp. nov., isolated from subsurface sediment undergoing uranium bioremediation.. Int J Syst Evol Microbiol. 58(Pt 5):1075-8.
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Department of Microbiology