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Yun J, Malvankar NS, Ueki T, Lovley DR.\'a0 2016.\'a0\'a0Functional environmental proteomics: elucidating the role of a c-type cytochrome abundant during uranium bioremediation.. ISME J. 10(2):310-20.\par \par Stewart LC, Jung J-H, Kim Y-T, Kwon S-W, Park C-S, Holden JF.\'a0 2015.\'a0\'a0Methanocaldococcus bathoardescens sp. nov., a hyperthermophilic methanogen isolated from a volcanically active deep-sea hydrothermal vent.. Int J Syst Evol Microbiol. 65(Pt 4):1280-3.\par \par Liu X, Tremblay P-L, Malvankar NS, Nevin KP, Lovley DR, Vargas M.\'a0 2014.\'a0\'a0A Geobacter sulfurreducens strain expressing pseudomonas aeruginosa type IV pili localizes OmcS on pili but is deficient in Fe(III) oxide reduction and current production.. Appl Environ Microbiol. 80(3):1219-24.\par \par Mirza BS, Potisap C, N\'fcsslein K, Bohannan BJM, Rodrigues JLM.\'a0 2014.\'a0\'a0Response of free-living nitrogen-fixing microorganisms to land use change in the Amazon rainforest.. Appl Environ Microbiol. 80(1):281-8.\par \par Zhang T, Bain TS, Barlett MA, Dar SA, Snoeyenbos-West OL, Nevin KP, Lovley DR.\'a0 2014.\'a0\'a0Sulfur oxidation to sulfate coupled with electron transfer to electrodes by Desulfuromonas strain TZ1.. Microbiology (Reading). 160(Pt 1):123-129.\par \par Hensley SA, Jung J-H, Park C-S, Holden JF.\'a0 2014.\'a0\'a0Thermococcus paralvinellae sp. nov. and Thermococcus cleftensis sp. nov. of hyperthermophilic heterotrophs from deep-sea hydrothermal vents.. Int J Syst Evol Microbiol. 64(Pt 11):3655-9.\par \par Holmes DE, Giloteaux L, Williams KH, Wrighton KC, Wilkins MJ, Thompson CA, Roper TJ, Long PE, Lovley DR.\'a0 2013.\'a0\'a0Enrichment of specific protozoan populations during in situ bioremediation of uranium-contaminated groundwater.. ISME J. 7(7):1286-98.\par \par Holmes DE, Giloteaux L, Barlett M, Chavan MA, Smith JA, Williams KH, Wilkins M, Long P, Lovley DR.\'a0 2013.\'a0\'a0Molecular analysis of the in situ growth rates of subsurface Geobacter species.. Appl Environ Microbiol. 79(5):1646-53.\par \par Zhang T, Bain TS, Nevin KP, Barlett MA, Lovley DR.\'a0 2012.\'a0\'a0Anaerobic benzene oxidation by Geobacter species.. Appl Environ Microbiol. 78(23):8304-10.\par \par Burand JP, Kim W, Afonso CL, Tulman ER, Kutish GF, Lu Z, Rock DL.\'a0 2012.\'a0\'a0Analysis of the genome of the sexually transmitted insect virus Helicoverpa zea nudivirus 2.. Viruses. 4(1):28-61.\par \par Jung J-H, Lee J-H, Holden JF, Seo D-H, Shin H, Kim H-Y, Kim W, Ryu S, Park C-S.\'a0 2012.\'a0\'a0Complete genome sequence of the hyperthermophilic archaeon Pyrococcus sp. strain ST04, isolated from a deep-sea hydrothermal sulfide chimney on the Juan de Fuca Ridge.. J Bacteriol. 194(16):4434-5.\par \par Jung J-H, Holden JF, Seo D-H, Park K-H, Shin H, Ryu S, Lee J-H, Park C-S.\'a0 2012.\'a0\'a0Complete genome sequence of the hyperthermophilic archaeon Thermococcus sp. strain CL1, isolated from a Paralvinella sp. polychaete worm collected from a hydrothermal vent.. J Bacteriol. 194(17):4769-70.\par \par Aklujkar M, Haveman SA, DiDonato R, Chertkov O, Han CS, Land ML, Brown P, Lovley DR.\'a0 2012.\'a0\'a0The genome of Pelobacter carbinolicus reveals surprising metabolic capabilities and physiological features.. BMC Genomics. 13:690.\par \par Ver Eecke HC, Butterfield DA, Huber JA, Lilley MD, Olson EJ, Roe KK, Evans LJ, Merkel AY, Cantin HV, Holden JF.\'a0 2012.\'a0\'a0Hydrogen-limited growth of hyperthermophilic methanogens at deep-sea hydrothermal vents.. Proc Natl Acad Sci U S A. 109(34):13674-9.\par \par Boles AR, Conneely T, McKeever R, Nixon P, N\'fcsslein KR, Ergas SJ.\'a0 2012.\'a0\'a0Performance of a pilot-scale packed bed reactor for perchlorate reduction using a sulfur oxidizing bacterial consortium.. Biotechnol Bioeng. 109(3):637-46.\par \par Richter LV, Sandler SJ, Weis RM.\'a0 2012.\'a0\'a0Two isoforms of Geobacter sulfurreducens PilA have distinct roles in pilus biogenesis, cytochrome localization, extracellular electron transfer, and biofilm formation.. J Bacteriol. 194(10):2551-63.\par \par Wilkins MJ, Callister SJ, Miletto M, Williams KH, Nicora CD, Lovley DR, Long PE, Lipton MS.\'a0 2011.\'a0\'a0Development of a biomarker for Geobacter activity and strain composition; proteogenomic analysis of the citrate synthase protein during bioremediation of U(VI).. Microb Biotechnol. 4(1):55-63.\par \par Shi S, Richardson AE, O'Callaghan M, Deangelis KM, Jones EE, Stewart A, Firestone MK, Condron LM.\'a0 2011.\'a0\'a0Effects of selected root exudate components on soil bacterial communities.. FEMS Microbiol Ecol. 77(3):600-10.\par \par Im J, Lee S-W, Bodrossy L, Barcelona MJ, Semrau JD.\'a0 2011.\'a0\'a0Field application of nitrogen and phenylacetylene to mitigate greenhouse gas emissions from landfill cover soils: effects on microbial community structure.. Appl Microbiol Biotechnol. 89(1):189-200.\par \par Burand JP, Kim W, Welch A, Elkinton JS.\'a0 2011.\'a0\'a0Identification of a nucleopolyhedrovirus in winter moth populations from Massachusetts.. J Invertebr Pathol. 108(3):217-9.\par \par Miletto M, Williams KH, N'Guessan AL, Lovley DR.\'a0 2011.\'a0\'a0Molecular analysis of the metabolic rates of discrete subsurface populations of sulfate reducers.. Appl Environ Microbiol. 77(18):6502-9.\par \par Marceau AH, Bahng S, Massoni SC, George NP, Sandler SJ, Marians KJ, Keck JL.\'a0 2011.\'a0\'a0Structure of the SSB-DNA polymerase III interface and its role in DNA replication.. EMBO J. 30(20):4236-47.\par \par Ueki T, Lovley DR.\'a0 2010.\'a0\'a0Genome-wide gene regulation of biosynthesis and energy generation by a novel transcriptional repressor in Geobacter species.. Nucleic Acids Res. 38(3):810-21.\par \par Krushkal J, Ju\'e1rez K, Barbe JF, Qu Y, Andrade A, Puljic M, Adkins RM, Lovley DR, Ueki T.\'a0 2010.\'a0\'a0Genome-wide survey for PilR recognition sites of the metal-reducing prokaryote Geobacter sulfurreducens.. Gene. 469(1-2):31-44.\par \par Aklujkar M, Lovley DR.\'a0 2010.\'a0\'a0Interference with histidyl-tRNA synthetase by a CRISPR spacer sequence as a factor in the evolution of Pelobacter carbinolicus.. BMC Evol Biol. 10:230.\par \par Stout LM, Dodova EN, Tyson JF, N\'fcsslein K.\'a0 2010.\'a0\'a0Phytoprotective influence of bacteria on growth and cadmium accumulation in the aquatic plant Lemna minor.. Water Res. 44(17):4970-9.\par \par Inoue K, Qian X, Morgado L, Kim B-C, Mester T, Izallalen M, Salgueiro CA, Lovley DR.\'a0 2010.\'a0\'a0Purification and characterization of OmcZ, an outer-surface, octaheme c-type cytochrome essential for optimal current production by Geobacter sulfurreducens.. Appl Environ Microbiol. 76(12):3999-4007.\par \par Nevin KP, Kim B-C, Glaven RH, Johnson JP, Woodard TL, Meth\'e9 BA, Didonato RJ, Covalla SF, Franks AE, Liu A et al..\'a0 2009.\'a0\'a0Anode biofilm transcriptomics reveals outer surface components essential for high density current production in Geobacter sulfurreducens fuel cells.. PLoS One. 4(5):e5628.\par \par Sagaram U S, Deangelis KM, Trivedi P, Andersen GL, Lu S-E, Wang N.\'a0 2009.\'a0\'a0Bacterial diversity analysis of Huanglongbing pathogen-infected citrus, using PhyloChip arrays and 16S rRNA gene clone library sequencing.. Appl Environ Microbiol. 75(6):1566-74.\par \par Sahu AK, Conneely T, N\'fcsslein K, Ergas SJ.\'a0 2009.\'a0\'a0Hydrogenotrophic denitrification and perchlorate reduction in ion exchange brines using membrane biofilm reactors.. Biotechnol Bioeng. 104(3):483-91.\par \par Rich SM, Leendertz FH, Xu G, LeBreton M, Djoko CF, Aminake MN, Takang EE, Diffo JLD, Pike BL, Rosenthal BM et al..\'a0 2009.\'a0\'a0The origin of malignant malaria.. Proc Natl Acad Sci U S A. 106(35):14902-7.\par \par Wilkins MJ, VerBerkmoes NC, Williams KH, Callister SJ, Mouser PJ, Elifantz H, N'guessan LA, Thomas BC, Nicora CD, Shah MB et al..\'a0 2009.\'a0\'a0Proteogenomic monitoring of Geobacter physiology during stimulated uranium bioremediation.. Appl Environ Microbiol. 75(20):6591-9.\par \par Holmes DE, O'Neil RA, Chavan MA, N'guessan LA, Vrionis HA, Perpetua LA, Larrahondo JM, DiDonato R, Liu A, Lovley DR.\'a0 2009.\'a0\'a0Transcriptome of Geobacter uraniireducens growing in uranium-contaminated subsurface sediments.. ISME J. 3(2):216-30.\par \par Tran HT, Krushkal J, Antommattei FM, Lovley DR, Weis RM.\'a0 2008.\'a0\'a0Comparative genomics of Geobacter chemotaxis genes reveals diverse signaling function.. BMC Genomics. 9:471.\par \par Segura D, Mahadevan R, Ju\'e1rez K, Lovley DR.\'a0 2008.\'a0\'a0Computational and experimental analysis of redundancy in the central metabolism of Geobacter sulfurreducens.. PLoS Comput Biol. 4(2):e36.\par \par Holmes DE, Mester T, O'Neil RA, Perpetua LA, Larrahondo JM, Glaven R, Sharma ML, Ward JE, Nevin KP, Lovley DR.\'a0 2008.\'a0\'a0Genes for two multicopper proteins required for Fe(III) oxide reduction in Geobacter sulfurreducens have different expression patterns both in the subsurface and on energy-harvesting electrodes.. Microbiology. 154(Pt 5):1422-35.\par \par Shelobolina ES, Vrionis HA, Findlay RH, Lovley DR.\'a0 2008.\'a0\'a0Geobacter uraniireducens sp. nov., isolated from subsurface sediment undergoing uranium bioremediation.. Int J Syst Evol Microbiol. 58(Pt 5):1075-8.\par \par Chin K-J, Sharma ML, Russell LA, O'Neill KR, Lovley DR.\'a0 2008.\'a0\'a0Quantifying expression of a dissimilatory (bi)sulfite reductase gene in petroleum-contaminated marine harbor sediments.. Microb Ecol. 55(3):489-99.\par \par Gomez-Alvarez V, King GM, N\'fcsslein K.\'a0 2007.\'a0\'a0Comparative bacterial diversity in recent Hawaiian volcanic deposits of different ages.. FEMS Microbiol Ecol. 60(1):60-73.\par \par Shelobolina ES, Nevin KP, Blakeney-Hayward JD, Johnsen CV, Plaia TW, Krader P, Woodard T, Holmes DE, Vanpraagh C G, Lovley DR.\'a0 2007.\'a0\'a0Geobacter pickeringii sp. nov., Geobacter argillaceus sp. nov. and Pelosinus fermentans gen. nov., sp. nov., isolated from subsurface kaolin lenses.. Int J Syst Evol Microbiol. 57(Pt 1):126-35.\par \par Ueki T, Lovley DR.\'a0 2007.\'a0\'a0Heat-shock sigma factor RpoH from Geobacter sulfurreducens.. Microbiology. 153(Pt 3):838-46.\par \par Mayrose I, Penn O, Erez E, Rubinstein ND, Shlomi T, Freund N T, Bublil EM, Ruppin E, Sharan R, Gershoni JM et al..\'a0 2007.\'a0\'a0Pepitope: epitope mapping from affinity-selected peptides.. Bioinformatics. 23(23):3244-6.\par \par Holmes DE, Nevin KP, Woodard TL, Peacock AD, Lovley DR.\'a0 2007.\'a0\'a0Prolixibacter bellariivorans gen. nov., sp. nov., a sugar-fermenting, psychrotolerant anaerobe of the phylum Bacteroidetes, isolated from a marine-sediment fuel cell.. Int J Syst Evol Microbiol. 57(Pt 4):701-7.\par \par Waldron PJ, Petsch ST, Martini AM, N\'fcsslein K, N\'fcslein K.\'a0 2007.\'a0\'a0Salinity constraints on subsurface archaeal diversity and methanogenesis in sedimentary rock rich in organic matter.. Appl Environ Microbiol. 73(13):4171-9.\par \par Stern A, Doron-Faigenboim A, Erez E, Martz E, Bacharach E, Pupko T.\'a0 2007.\'a0\'a0Selecton 2007: advanced models for detecting positive and purifying selection using a Bayesian inference approach.. Nucleic Acids Res. 35(Web Server issue):W506-11.\par \par Holmes DE, O'Neil RA, Vrionis HA, N'guessan LA, Ortiz-Bernad I, Larrahondo MJ, Adams LA, Ward JA, Nicoll JS, Nevin KP et al..\'a0 2007.\'a0\'a0Subsurface clade of Geobacteraceae that predominates in a diversity of Fe(III)-reducing subsurface environments.. ISME J. 1(8):663-77.\par \par Centore RC, Sandler SJ.\'a0 2007.\'a0\'a0UvrD limits the number and intensities of RecA-green fluorescent protein structures in Escherichia coli K-12.. J Bacteriol. 189(7):2915-20.\par \par Kaadige MR, Lopes JM.\'a0 2006.\'a0\'a0Analysis of Opi1p repressor mutants.. Curr Genet. 49(1):30-8.\par \par Yan B, N\'fa\'f1ez C, Ueki T, Esteve-N\'fa\'f1ez A, Puljic M, Adkins RM, Meth\'e9 BA, Lovley DR, Krushkal J.\'a0 2006.\'a0\'a0Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information.. Gene. 384:73-95.\par \par Butler JE, Glaven RH, Esteve-N\'fa\'f1ez A, N\'fa\'f1ez C, Shelobolina ES, Bond DR, Lovley DR.\'a0 2006.\'a0\'a0Genetic characterization of a single bifunctional enzyme for fumarate reduction and succinate oxidation in Geobacter sulfurreducens and engineering of fumarate reduction in Geobacter metallireducens.. J Bacteriol. 188(2):450-5.\par \par Morita YS, Sena CBC, Waller RF, Kurokawa K, Sernee FM, Nakatani F, Haites RE, Billman-Jacobe H, McConville MJ, Maeda Y et al..\'a0 2006.\'a0\'a0PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of phosphatidylinositol mannoside in mycobacteria.. J Biol Chem. 281(35):25143-55.\par \par Bond DR, Mester T, Nesb\'f8 CL, Izquierdo-Lopez AV, Collart FL, Lovley DR.\'a0 2005.\'a0\'a0Characterization of citrate synthase from Geobacter sulfurreducens and evidence for a family of citrate synthases similar to those of eukaryotes throughout the Geobacteraceae.. Appl Environ Microbiol. 71(7):3858-65.\par \par Nevin KP, Holmes DE, Woodard TL, Hinlein ES, Ostendorf DW, Lovley DR.\'a0 2005.\'a0\'a0Geobacter bemidjiensis sp. nov. and Geobacter psychrophilus sp. nov., two novel Fe(III)-reducing subsurface isolates.. Int J Syst Evol Microbiol. 55(Pt 4):1667-74.\par \par Afkar E, Reguera G, Schiffer M, Lovley DR.\'a0 2005.\'a0\'a0A novel Geobacteraceae-specific outer membrane protein J (OmpJ) is essential for electron transport to Fe(III) and Mn(IV) oxides in Geobacter sulfurreducens.. BMC Microbiol. 5:41.\par \par Kim B-C, Leang C, Ding Y-HR, Glaven RH, Coppi MV, Lovley DR.\'a0 2005.\'a0\'a0OmcF, a putative c-Type monoheme outer membrane cytochrome required for the expression of other outer membrane cytochromes in Geobacter sulfurreducens.. J Bacteriol. 187(13):4505-13.\par \par Mehta T, Coppi MV, Childers SE, Lovley DR.\'a0 2005.\'a0\'a0Outer membrane c-type cytochromes required for Fe(III) and Mn(IV) oxide reduction in Geobacter sulfurreducens.. Appl Environ Microbiol. 71(12):8634-41.\par \par Kang J Y, Hong Y, Ashida H, Shishioh N, Murakami Y, Morita YS, Maeda Y, Kinoshita T.\'a0 2005.\'a0\'a0PIG-V involved in transferring the second mannose in glycosylphosphatidylinositol.. J Biol Chem. 280(10):9489-97.\par \par Leang C, Lovley DR.\'a0 2005.\'a0\'a0Regulation of two highly similar genes, omcB and omcC, in a 10 kb chromosomal duplication in Geobacter sulfurreducens.. Microbiology. 151(Pt 6):1761-7.\par \par Stout LM, N\'fcsslein K.\'a0 2005.\'a0\'a0Shifts in rhizoplane communities of aquatic plants after cadmium exposure.. Appl Environ Microbiol. 71(5):2484-92.\par \par Holmes DE, Nevin KP, Lovley DR.\'a0 2004.\'a0\'a0Comparison of 16S rRNA, nifD, recA, gyrB, rpoB and fusA genes within the family Geobacteraceae fam. nov.. Int J Syst Evol Microbiol. 54(Pt 5):1591-9.\par \par McCool JD, Ford CC, Sandler SJ.\'a0 2004.\'a0\'a0A dnaT mutant with phenotypes similar to those of a priA2::kan mutant in Escherichia coli K-12.. Genetics. 167(2):569-78.\par \par Shelobolina ES, Sullivan SA, O'Neill KR, Nevin KP, Lovley DR.\'a0 2004.\'a0\'a0Isolation, characterization, and U(VI)-reducing potential of a facultatively anaerobic, acid-resistant Bacterium from Low-pH, nitrate- and U(VI)-contaminated subsurface sediment and description of Salmonella subterranea sp. nov.. Appl Environ Microbiol. 70(5):2959-65.\par \par Butler JE, Kaufmann F, Coppi MV, N\'fa\'f1ez C, Lovley DR.\'a0 2004.\'a0\'a0MacA, a diheme c-type cytochrome involved in Fe(III) reduction by Geobacter sulfurreducens.. J Bacteriol. 186(12):4042-5.\par \par Holmes DE, Bond DR, O'Neil RA, Reimers CE, Tender LR, Lovley DR.\'a0 2004.\'a0\'a0Microbial communities associated with electrodes harvesting electricity from a variety of aquatic sediments.. Microb Ecol. 48(2):178-90.\par \par Holmes DE, Nicoll JS, Bond DR, Lovley DR.\'a0 2004.\'a0\'a0Potential role of a novel psychrotolerant member of the family Geobacteraceae, Geopsychrobacter electrodiphilus gen. nov., sp. nov., in electricity production by a marine sediment fuel cell.. Appl Environ Microbiol. 70(10):6023-30.\par \par Gov Y, Borovok I, Korem M, Singh VK, Jayaswal RK, Wilkinson BJ, Rich SM, Balaban N.\'a0 2004.\'a0\'a0Quorum sensing in Staphylococci is regulated via phosphorylation of three conserved histidine residues.. J Biol Chem. 279(15):14665-72.\par \par N\'fa\'f1ez C, Adams L, Childers S, Lovley DR.\'a0 2004.\'a0\'a0The RpoS sigma factor in the dissimilatory Fe(III)-reducing bacterium Geobacter sulfurreducens.. J Bacteriol. 186(16):5543-6.\par \par Vinogradov E, Korenevsky A, Lovley DR, Beveridge TJ.\'a0 2004.\'a0\'a0The structure of the core region of the lipopolysaccharide from Geobacter sulfurreducens.. Carbohydr Res. 339(18):2901-4.\par \par Lloyd JR, Leang C, Hodges Myerson AL, Coppi MV, Cuifo S, Methe B, Sandler SJ, Lovley DR.\'a0 2003.\'a0\'a0Biochemical and genetic characterization of PpcA, a periplasmic c-type cytochrome in Geobacter sulfurreducens.. Biochem J. 369(Pt 1):153-61.\par \par Gardocki M E, Lopes JM.\'a0 2003.\'a0\'a0Expression of the yeast PIS1 gene requires multiple regulatory elements including a Rox1p binding site.. J Biol Chem. 278(40):38646-52.\par \par Jara M, N\'fa\'f1ez C, Campoy S, Fern\'e1ndez de Henestrosa AR, Lovley DR, Barb\'e9 J.\'a0 2003.\'a0\'a0Geobacter sulfurreducens has two autoregulated lexA genes whose products do not bind the recA promoter: differing responses of lexA and recA to DNA damage.. J Bacteriol. 185(8):2493-502.\par \par Lim H, Eng J, Yates JR, Tollaksen SL, Giometti CS, Holden JF, Adams MWW, Reich CI, Olsen GJ, Hays LG.\'a0 2003.\'a0\'a0Identification of 2D-gel proteins: a comparison of MALDI/TOF peptide mass mapping to mu LC-ESI tandem mass spectrometry.. J Am Soc Mass Spectrom. 14(9):957-70.\par \par Leang C, Coppi MV, Lovley DR.\'a0 2003.\'a0\'a0OmcB, a c-type polyheme cytochrome, involved in Fe(III) reduction in Geobacter sulfurreducens.. J Bacteriol. 185(7):2096-103.\par \par Finneran KT, Johnsen CV, Lovley DR.\'a0 2003.\'a0\'a0Rhodoferax ferrireducens sp. nov., a psychrotolerant, facultatively anaerobic bacterium that oxidizes acetate with the reduction of Fe(III).. Int J Syst Evol Microbiol. 53(Pt 3):669-73.\par \par Ferreira MU, Ribeiro WL, Tonon AP, Kawamoto F, Rich SM.\'a0 2003.\'a0\'a0Sequence diversity and evolution of the malaria vaccine candidate merozoite surface protein-1 (MSP-1) of Plasmodium falciparum.. Gene. 304:65-75.\par \par Kashefi K, Holmes DE, Baross JA, Lovley DR.\'a0 2003.\'a0\'a0Thermophily in the Geobacteraceae: Geothermobacter ehrlichii gen. nov., sp. nov., a novel thermophilic member of the Geobacteraceae from the "Bag City" hydrothermal vent.. Appl Environ Microbiol. 69(5):2985-93.\par \par Burke WD, Malik HS, Rich SM, Eickbush TH.\'a0 2002.\'a0\'a0Ancient lineages of non-LTR retrotransposons in the primitive eukaryote, Giardia lamblia.. Mol Biol Evol. 19(5):619-30.\par \par Finneran KT, Forbush HM, VanPraagh C GV, Lovley DR.\'a0 2002.\'a0\'a0Desulfitobacterium metallireducens sp. nov., an anaerobic bacterium that couples growth to the reduction of metals and humic acids as well as chlorinated compounds.. Int J Syst Evol Microbiol. 52(Pt 6):1929-35.\par \par Kashefi K, Tor JM, Holmes DE, Gaw Van Praagh CV, Reysenbach A-L, Lovley DR.\'a0 2002.\'a0\'a0Geoglobus ahangari gen. nov., sp. nov., a novel hyperthermophilic archaeon capable of oxidizing organic acids and growing autotrophically on hydrogen with Fe(III) serving as the sole electron acceptor.. Int J Syst Evol Microbiol. 52(Pt 3):719-28.\par \par Tender LM, Reimers CE, Stecher HA, Holmes DE, Bond DR, Lowy DA, Pilobello K, Fertig SJ, Lovley DR.\'a0 2002.\'a0\'a0Harnessing microbially generated power on the seafloor.. Nat Biotechnol. 20(8):821-5.\par \par Chapelle FH, O'Neill K, Bradley PM, Meth\'e9 BA, Ciufo SA, Knobel LRL, Lovley DR.\'a0 2002.\'a0\'a0A hydrogen-based subsurface microbial community dominated by methanogens.. Nature. 415(6869):312-5.\par \par Klingbeil MM, Motyka SA, Englund PT.\'a0 2002.\'a0\'a0Multiple mitochondrial DNA polymerases in Trypanosoma brucei.. Mol Cell. 10(1):175-86.\par \par Kashefi K, Holmes DE, Reysenbach A-L, Lovley DR.\'a0 2002.\'a0\'a0Use of Fe(III) as an electron acceptor to recover previously uncultured hyperthermophiles: isolation and characterization of Geothermobacterium ferrireducens gen. nov., sp. nov.. Appl Environ Microbiol. 68(4):1735-42.\par \par Coates JD, Bhupathiraju VK, Achenbach LA, Mclnerney MJ, Lovley DR.\'a0 2001.\'a0\'a0Geobacter hydrogenophilus, Geobacter chapellei and Geobacter grbiciae, three new, strictly anaerobic, dissimilatory Fe(III)-reducers.. Int J Syst Evol Microbiol. 51(Pt 2):581-8.\par \par Kaufmann F, Lovley DR.\'a0 2001.\'a0\'a0Isolation and characterization of a soluble NADPH-dependent Fe(III) reductase from Geobacter sulfurreducens.. J Bacteriol. 183(15):4468-76.\par \par Magnuson TS, Isoyama N, Hodges-Myerson AL, Davidson G, Maroney MJ, Geesey GG, Lovley DR.\'a0 2001.\'a0\'a0Isolation, characterization and gene sequence analysis of a membrane-associated 89 kDa Fe(III) reducing cytochrome c from Geobacter sulfurreducens.. Biochem J. 359(Pt 1):147-52.\par \par Griffith KL, Wolf RE.\'a0 2001.\'a0\'a0Systematic mutagenesis of the DNA binding sites for SoxS in the Escherichia coli zwf and fpr promoters: identifying nucleotides required for DNA binding and transcription activation.. Mol Microbiol. 40(5):1141-54.\par \par Widmer G, Akiyoshi D, Buckholt MA, Feng X, Rich SM, Deary KM, Bowman CA, Xu P, Wang Y, Wang X et al..\'a0 2000.\'a0\'a0Animal propagation and genomic survey of a genotype 1 isolate of Cryptosporidium parvum.. Mol Biochem Parasitol. 108(2):187-97.\par \par Feng X, Rich SM, Akiyoshi D, Tumwine JK, Kekitiinwa A, Nabukeera N, Tzipori S, Widmer G.\'a0 2000.\'a0\'a0Extensive polymorphism in Cryptosporidium parvum identified by multilocus microsatellite analysis.. Appl Environ Microbiol. 66(8):3344-9.\par \par Ayala FJ, Rich SM.\'a0 2000.\'a0\'a0Genetic variation and the recent worldwide expansion of Plasmodium falciparum.. Gene. 261(1):161-70.\par \par Rich SM, Ferreira MU, Ayala FJ.\'a0 2000.\'a0\'a0The origin of antigenic diversity in Plasmodium falciparum.. Parasitol Today. 16(9):390-6.\par \par Rich SM, Ayala FJ.\'a0 2000.\'a0\'a0Population structure and recent evolution of Plasmodium falciparum.. Proc Natl Acad Sci U S A. 97(13):6994-7001.\par \par Sandler SJ, Hugenholtz P, Schleper C, DeLong EF, Pace NR, Clark AJ.\'a0 1999.\'a0\'a0Diversity of radA genes from cultured and uncultured archaea: comparative analysis of putative RadA proteins and their use as a phylogenetic marker.. J Bacteriol. 181(3):907-15.\par \par Ayala FJ, Escalante AA, Rich SM.\'a0 1999.\'a0\'a0Evolution of Plasmodium and the recent origin of the world populations of Plasmodium falciparum.. Parassitologia. 41(1-3):55-68.\par \par Coates JD, Ellis DJ, Gaw CV, Lovley DR.\'a0 1999.\'a0\'a0Geothrix fermentans gen. nov., sp. nov., a novel Fe(III)-reducing bacterium from a hydrocarbon-contaminated aquifer.. Int J Syst Bacteriol. 49 Pt 4:1615-22.\par \par Wood TI, Griffith KL, Fawcett WP, Jair KW, Schneider TD, Wolf RE.\'a0 1999.\'a0\'a0Interdependence of the position and orientation of SoxS binding sites in the transcriptional activation of the class I subset of Escherichia coli superoxide-inducible promoters.. Mol Microbiol. 34(3):414-30.\par \par Rooney-Varga JN, Anderson RT, Fraga JL, Ringelberg D, Lovley DR.\'a0 1999.\'a0\'a0Microbial communities associated with anaerobic benzene degradation in a petroleum-contaminated aquifer.. Appl Environ Microbiol. 65(7):3056-63.\par \par Liu J, Xu L, Sandler SJ, Marians KJ.\'a0 1999.\'a0\'a0Replication fork assembly at recombination intermediates is required for bacterial growth.. Proc Natl Acad Sci U S A. 96(7):3552-5.\par \par N\'fcsslein K, Tiedje JM.\'a0 1999.\'a0\'a0Soil bacterial community shift correlated with change from forest to pasture vegetation in a tropical soil.. Appl Environ Microbiol. 65(8):3622-6.\par \par Stolz JF, Ellis DJ, Blum JS, Ahmann D, Lovley DR, Oremland RS.\'a0 1999.\'a0\'a0Sulfurospirillum barnesii sp. nov. and Sulfurospirillum arsenophilum sp. nov., new members of the Sulfurospirillum clade of the epsilon Proteobacteria.. Int J Syst Bacteriol. 49 Pt 3:1177-80.\par \par Coates JD, Ellis DJ, Blunt-Harris EL, Gaw CV, Roden EE, Lovley DR.\'a0 1998.\'a0\'a0Recovery of humic-reducing bacteria from a diversity of environments.. Appl Environ Microbiol. 64(4):1504-9.\par \par Newman DK, Kennedy EK, Coates JD, Ahmann D, Ellis DJ, Lovley DR, Morel FM.\'a0 1997.\'a0\'a0Dissimilatory arsenate and sulfate reduction in Desulfotomaculum auripigmentum sp. nov.. Arch Microbiol. 168(5):380-8.\par \par Brendel V, Brocchieri L, Sandler SJ, Clark AJ, Karlin S.\'a0 1997.\'a0\'a0Evolutionary comparisons of RecA-like proteins across all major kingdoms of living organisms.. J Mol Evol. 44(5):528-41.\par \par Rich SM, Rosenthal BM, Telford SR, Spielman A, Hartl DL, Ayala FJ.\'a0 1997.\'a0\'a0Heterogeneity of the internal transcribed spacer (ITS-2) region within individual deer ticks.. Insect Mol Biol. 6(2):123-9.\par \par Rich SM, Hudson RR, Ayala FJ.\'a0 1997.\'a0\'a0Plasmodium falciparum antigenic diversity: evidence of clonal population structure.. Proc Natl Acad Sci U S A. 94(24):13040-5.\par \par Klingbeil MM, Walker DJ, Arnette R, Sidawy E, Hayton K, Komuniecki PR, Komuniecki R.\'a0 1996.\'a0\'a0Identification of a novel dihydrolipoyl dehydrogenase-binding protein in the pyruvate dehydrogenase complex of the anaerobic parasitic nematode, Ascaris suum.. J Biol Chem. 271(10):5451-7.\par \par Coates JD, Phillips EJ, Lonergan DJ, Jenter H, Lovley DR.\'a0 1996.\'a0\'a0Isolation of Geobacter species from diverse sedimentary environments.. Appl Environ Microbiol. 62(5):1531-6.\par \par Boyd EF, Hill CW, Rich SM, Hartl DL.\'a0 1996.\'a0\'a0Mosaic structure of plasmids from natural populations of Escherichia coli.. Genetics. 143(3):1091-100.\par \par Armstrong PM, Rich SM, Smith RD, Hartl DL, Spielman A, Telford SR.\'a0 1996.\'a0\'a0A new Borrelia infecting Lone Star ticks.. Lancet. 347(8993):67-8.\par \par Lonergan DJ, Jenter HL, Coates JD, Phillips EJ, Schmidt TM, Lovley DR.\'a0 1996.\'a0\'a0Phylogenetic analysis of dissimilatory Fe(III)-reducing bacteria.. J Bacteriol. 178(8):2402-8.\par \par Sandler SJ, Satin LH, Samra HS, Clark AJ.\'a0 1996.\'a0\'a0recA-like genes from three archaean species with putative protein products similar to Rad51 and Dmc1 proteins of the yeast Saccharomyces cerevisiae.. Nucleic Acids Res. 24(11):2125-32.\par \par Caporale DA, Rich SM, Spielman A, Telford SR, Kocher TD.\'a0 1995.\'a0\'a0Discriminating between Ixodes ticks by means of mitochondrial DNA sequences.. Mol Phylogenet Evol. 4(4):361-5.\par \par Rich SM, Caporale DA, Telford SR, Kocher TD, Hartl DL, Spielman A.\'a0 1995.\'a0\'a0Distribution of the Ixodes ricinus-like ticks of eastern North America.. Proc Natl Acad Sci U S A. 92(14):6284-8.\par \par Lovley DR, Phillips EJ, Lonergan DJ, Widman PK.\'a0 1995.\'a0\'a0Fe(III) and S0 reduction by Pelobacter carbinolicus.. Appl Environ Microbiol. 61(6):2132-8.\par \par Caccavo F, Lonergan DJ, Lovley DR, Davis M, Stolz JF, McInerney MJ.\'a0 1994.\'a0\'a0Geobacter sulfurreducens sp. nov., a hydrogen- and acetate-oxidizing dissimilatory metal-reducing microorganism.. Appl Environ Microbiol. 60(10):3752-9.\par \par Sandler SJ, Clark AJ.\'a0 1994.\'a0\'a0Mutational analysis of sequences in the recF gene of Escherichia coli K-12 that affect expression.. J Bacteriol. 176(13):4011-6.\par \par Sandler SJ, Clark AJ.\'a0 1994.\'a0\'a0RecOR suppression of recF mutant phenotypes in Escherichia coli K-12.. J Bacteriol. 176(12):3661-72.\par \par Sandler SJ.\'a0 1994.\'a0\'a0Studies on the mechanism of reduction of UV-inducible sulAp expression by recF overexpression in Escherichia coli K-12.. Mol Gen Genet. 245(6):741-9.\par \par Duran E, Komuniecki RW, Komuniecki PR, Wheelock MJ, Klingbeil MM, Ma YC, Johnson KR.\'a0 1993.\'a0\'a0Characterization of cDNA clones for the 2-methyl branched-chain enoyl-CoA reductase. An enzyme involved in branched-chain fatty acid synthesis in anaerobic mitochondria of the parasitic nematode Ascaris suum.. J Biol Chem. 268(30):22391-6.\par \par Sandler SJ, Clark AJ.\'a0 1993.\'a0\'a0Use of high and low level overexpression plasmids to test mutant alleles of the recF gene of Escherichia coli K-12 for partial activity.. Genetics. 135(3):643-54.\par \par Sandler SJ, Chackerian B, Li JT, Clark AJ.\'a0 1992.\'a0\'a0Sequence and complementation analysis of recF genes from Escherichia coli, Salmonella typhimurium, Pseudomonas putida and Bacillus subtilis: evidence for an essential phosphate binding loop.. Nucleic Acids Res. 20(4):839-45.\par \par Sandler SJ, Clark AJ.\'a0 1990.\'a0\'a0Factors affecting expression of the recF gene of Escherichia coli K-12.. Gene. 86(1):35-43.\par \par }