Giloteaux L, Holmes DE, Williams KH, Wrighton KC, Wilkins MJ, Montgomery AP, Smith JA, Orellana R, Thompson CA, Roper TJ et al..  2013.  Characterization and transcription of arsenic respiration and resistance genes during in situ uranium bioremediation.. ISME J. 7(2):370-83.

Elifantz H, N'guessan LA, Mouser PJ, Williams KH, Wilkins MJ, Risso C, Holmes DE, Long PE, Lovley DR.  2010.  Expression of acetate permease-like (apl ) genes in subsurface communities of Geobacter species under fluctuating acetate concentrations.. FEMS Microbiol Ecol. 73(3):441-9.

Mouser PJ, N'guessan LA, Elifantz H, Holmes DE, Williams KH, Wilkins MJ, Long PE, Lovley DR.  2009.  Influence of heterogeneous ammonium availability on bacterial community structure and the expression of nitrogen fixation and ammonium transporter genes during in situ bioremediation of uranium-contaminated groundwater.. Environ Sci Technol. 43(12):4386-92.

O'Neil RA, Holmes DE, Coppi MV, Adams LA, Larrahondo JM, Ward JE, Nevin KP, Woodard TL, Vrionis HA, N'guessan LA et al..  2008.  Gene transcript analysis of assimilatory iron limitation in Geobacteraceae during groundwater bioremediation.. Environ Microbiol. 10(5):1218-30.

Holmes DE, Chaudhuri SK, Nevin KP, Mehta T, Methé BA, Liu A, Ward JE, Woodard TL, Webster J, Lovley DR.  2006.  Microarray and genetic analysis of electron transfer to electrodes in Geobacter sulfurreducens.. Environ Microbiol. 8(10):1805-15.

Holmes DE, Nevin KP, Lovley DR.  2004.  In situ expression of nifD in Geobacteraceae in subsurface sediments.. Appl Environ Microbiol. 70(12):7251-9.