Lovley DR.  2022.  Microbe Profile: : a model for novel physiologies of biogeochemical and technological significance.. Microbiology (Reading). 168(2)

Holmes DE, Orelana R, Giloteaux L, Wang L-Y, Shrestha P, Williams K, Lovley DR, Rotaru A-E.  2018.  Potential for Methanosarcina to Contribute to Uranium Reduction during Acetate-Promoted Groundwater Bioremediation.. Microb Ecol. 76(3):660-667.

Yun J, Malvankar NS, Ueki T, Lovley DR.  2016.  Functional environmental proteomics: elucidating the role of a c-type cytochrome abundant during uranium bioremediation.. ISME J. 10(2):310-20.

Holmes DE, Giloteaux L, Chaurasia AK, Williams KH, Luef B, Wilkins MJ, Wrighton KC, Thompson CA, Comolli LR, Lovley DR.  2015.  Evidence of Geobacter-associated phage in a uranium-contaminated aquifer.. ISME J. 9(2):333-46.

Williams KH, Bargar JR, Lloyd JR, Lovley DR.  2013.  Bioremediation of uranium-contaminated groundwater: a systems approach to subsurface biogeochemistry.. Curr Opin Biotechnol. 24(3):489-97.

Giloteaux L, Holmes DE, Williams KH, Wrighton KC, Wilkins MJ, Montgomery AP, Smith JA, Orellana R, Thompson CA, Roper TJ et al..  2013.  Characterization and transcription of arsenic respiration and resistance genes during in situ uranium bioremediation.. ISME J. 7(2):370-83.

Holmes DE, Giloteaux L, Williams KH, Wrighton KC, Wilkins MJ, Thompson CA, Roper TJ, Long PE, Lovley DR.  2013.  Enrichment of specific protozoan populations during in situ bioremediation of uranium-contaminated groundwater.. ISME J. 7(7):1286-98.

Williams KH, Wilkins MJ, A N'Guessan L, Arey B, Dodova E, Dohnalkova A, Holmes D, Lovley DR, Long PE.  2013.  Field evidence of selenium bioreduction in a uranium-contaminated aquifer.. Environ Microbiol Rep. 5(3):444-52.

Holmes DE, Giloteaux L, Barlett M, Chavan MA, Smith JA, Williams KH, Wilkins M, Long P, Lovley DR.  2013.  Molecular analysis of the in situ growth rates of subsurface Geobacter species.. Appl Environ Microbiol. 79(5):1646-53.

Liang Y, Van Nostrand JD, N'guessan LA, Peacock AD, Deng Y, Long PE, Resch TC, Wu L, He Z, Li G et al..  2012.  Microbial functional gene diversity with a shift of subsurface redox conditions during In Situ uranium reduction.. Appl Environ Microbiol. 78(8):2966-72.

Tremblay P-L, Summers ZM, Glaven RH, Nevin KP, Zengler K, Barrett CL, Qiu Y, Palsson BO, Lovley DR.  2011.  A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution.. Environ Microbiol. 13(1):13-23.

Wilkins MJ, Callister SJ, Miletto M, Williams KH, Nicora CD, Lovley DR, Long PE, Lipton MS.  2011.  Development of a biomarker for Geobacter activity and strain composition; proteogenomic analysis of the citrate synthase protein during bioremediation of U(VI).. Microb Biotechnol. 4(1):55-63.

Fang Y, Scheibe TD, Mahadevan R, Garg S, Long PE, Lovley DR.  2011.  Direct coupling of a genome-scale microbial in silico model and a groundwater reactive transport model.. J Contam Hydrol. 122(1-4):96-103.

Zhuang K, Izallalen M, Mouser P, Richter H, Risso C, Mahadevan R, Lovley DR.  2011.  Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in anoxic subsurface environments.. ISME J. 5(2):305-16.

Lovley DR, Nevin KP.  2011.  A shift in the current: new applications and concepts for microbe-electrode electron exchange.. Curr Opin Biotechnol. 22(3):441-8.

Elifantz H, N'guessan LA, Mouser PJ, Williams KH, Wilkins MJ, Risso C, Holmes DE, Long PE, Lovley DR.  2010.  Expression of acetate permease-like (apl ) genes in subsurface communities of Geobacter species under fluctuating acetate concentrations.. FEMS Microbiol Ecol. 73(3):441-9.

Aklujkar M, Young ND, Holmes D, Chavan M, Risso C, Kiss HE, Han CS, Land ML, Lovley DR.  2010.  The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environments.. BMC Genomics. 11:490.

Zhao J, Fang Y, Scheibe TD, Lovley DR, Mahadevan R.  2010.  Modeling and sensitivity analysis of electron capacitance for Geobacter in sedimentary environments.. J Contam Hydrol. 112(1-4):30-44.

N'guessan LA, Elifantz H, Nevin KP, Mouser PJ, Methé B, Woodard TL, Manley K, Williams KH, Wilkins MJ, Larsen JT et al..  2010.  Molecular analysis of phosphate limitation in Geobacteraceae during the bioremediation of a uranium-contaminated aquifer.. ISME J. 4(2):253-66.

Scheibe TD, Mahadevan R, Fang Y, Garg S, Long PE, Lovley DR.  2009.  Coupling a genome-scale metabolic model with a reactive transport model to describe in situ uranium bioremediation.. Microb Biotechnol. 2(2):274-86.

Sun J, Sayyar B, Butler JE, Pharkya P, Fahland TR, Famili I, Schilling CH, Lovley DR, Mahadevan R.  2009.  Genome-scale constraint-based modeling of Geobacter metallireducens.. BMC Syst Biol. 3:15.

Wilkins MJ, VerBerkmoes NC, Williams KH, Callister SJ, Mouser PJ, Elifantz H, N'guessan LA, Thomas BC, Nicora CD, Shah MB et al..  2009.  Proteogenomic monitoring of Geobacter physiology during stimulated uranium bioremediation.. Appl Environ Microbiol. 75(20):6591-9.

Mouser PJ, Holmes DE, Perpetua LA, DiDonato R, Postier B, Liu A, Lovley DR.  2009.  Quantifying expression of Geobacter spp. oxidative stress genes in pure culture and during in situ uranium bioremediation.. ISME J. 3(4):454-65.

O'Neil RA, Holmes DE, Coppi MV, Adams LA, Larrahondo JM, Ward JE, Nevin KP, Woodard TL, Vrionis HA, N'guessan LA et al..  2008.  Gene transcript analysis of assimilatory iron limitation in Geobacteraceae during groundwater bioremediation.. Environ Microbiol. 10(5):1218-30.

Izallalen M, Mahadevan R, Burgard A, Postier B, DiDonato R, Sun J, Schilling CH, Lovley DR.  2008.  Geobacter sulfurreducens strain engineered for increased rates of respiration.. Metab Eng. 10(5):267-75.

Risso C, Methé BA, Elifantz H, Holmes DE, Lovley DR.  2008.  Highly conserved genes in Geobacter species with expression patterns indicative of acetate limitation.. Microbiology. 154(Pt 9):2589-99.

Butler JE, He Q, Nevin KP, He Z, Zhou J, Lovley DR.  2007.  Genomic and microarray analysis of aromatics degradation in Geobacter metallireducens and comparison to a Geobacter isolate from a contaminated field site.. BMC Genomics. 8:180.

Shelobolina ES, Coppi MV, Korenevsky AA, DiDonato LN, Sullivan SA, Konishi H, Xu H, Leang C, Butler JE, Kim B-C et al..  2007.  Importance of c-Type cytochromes for U(VI) reduction by Geobacter sulfurreducens.. BMC Microbiol. 7:16.

Holmes DE, O'Neil RA, Vrionis HA, N'guessan LA, Ortiz-Bernad I, Larrahondo MJ, Adams LA, Ward JA, Nicoll JS, Nevin KP et al..  2007.  Subsurface clade of Geobacteraceae that predominates in a diversity of Fe(III)-reducing subsurface environments.. ISME J. 1(8):663-77.

Chang Y-J, Long PE, Geyer R, Peacock AD, Resch CT, Sublette K, Pfiffner S, Smithgall A, Anderson RT, Vrionis HA et al..  2005.  Microbial incorporation of 13C-labeled acetate at the field scale: detection of microbes responsible for reduction of U(VI).. Environ Sci Technol. 39(23):9039-48.

Vrionis HA, Anderson RT, Ortiz-Bernad I, O'Neill KR, Resch CT, Peacock AD, Dayvault R, White DC, Long PE, Lovley DR.  2005.  Microbiological and geochemical heterogeneity in an in situ uranium bioremediation field site.. Appl Environ Microbiol. 71(10):6308-18.

Gregory KB, Lovley DR.  2005.  Remediation and recovery of uranium from contaminated subsurface environments with electrodes.. Environ Sci Technol. 39(22):8943-7.

Lovley DR, Holmes DE, Nevin KP.  2004.  Dissimilatory Fe(III) and Mn(IV) reduction.. Adv Microb Physiol. 49:219-86.

Holmes DE, Nevin KP, Lovley DR.  2004.  In situ expression of nifD in Geobacteraceae in subsurface sediments.. Appl Environ Microbiol. 70(12):7251-9.

Ortiz-Bernad I, Anderson RT, Vrionis HA, Lovley DR.  2004.  Resistance of solid-phase U(VI) to microbial reduction during in situ bioremediation of uranium-contaminated groundwater.. Appl Environ Microbiol. 70(12):7558-60.

Ortiz-Bernad I, Anderson RT, Vrionis HA, Lovley DR.  2004.  Vanadium respiration by Geobacter metallireducens: novel strategy for in situ removal of vanadium from groundwater.. Appl Environ Microbiol. 70(5):3091-5.

Lloyd JR, Lovley DR, Macaskie LE.  2003.  Biotechnological application of metal-reducing microorganisms.. Adv Appl Microbiol. 53:85-128.

Lovley DR.  2003.  Cleaning up with genomics: applying molecular biology to bioremediation.. Nat Rev Microbiol. 1(1):35-44.

Nevin KP, Finneran KT, Lovley DR.  2003.  Microorganisms associated with uranium bioremediation in a high-salinity subsurface sediment.. Appl Environ Microbiol. 69(6):3672-5.

Rothermich MM, Hayes LA, Lovley DR.  2002.  Anaerobic, sulfate-dependent degradation of polycyclic aromatic hydrocarbons in petroleum-contaminated harbor sediment.. Environ Sci Technol. 36(22):4811-7.

Lovley DR.  2002.  Analysis of the genetic potential and gene expression of microbial communities involved in the in situ bioremediation of uranium and harvesting electrical energy from organic matter.. OMICS. 6(4):331-9.

Bond DR, Holmes DE, Tender LM, Lovley DR.  2002.  Electrode-reducing microorganisms that harvest energy from marine sediments.. Science. 295(5554):483-5.

Hayes LA, Lovley DR.  2002.  Specific 16S rDNA sequences associated with naphthalene degradation under sulfate-reducing conditions in harbor sediments.. Microb Ecol. 43(1):134-45.