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Szmuc E, Walker DJF, Kireev D, Akinwande D, Lovley DR, Keitz B, Ellington A.\'a0 2023.\'a0\'a0Engineering Geobacter pili to produce metal:organic filaments.. Biosens Bioelectron. 222:114993.\par \par Rivera SL, Espaillat A, Aditham AK, Shieh P, Muriel-Mundo C, Kim J, Cava F, M Siegrist S.\'a0 2021.\'a0\'a0Chemically Induced Cell Wall Stapling in Bacteria.. Cell Chem Biol. 28(2):213-220.e4.\par \par Garc\'eda-Heredia A, Kado T, Sein CE, Puffal J, Osman SH, Judd J, Gray TA, Morita YS, M Siegrist S.\'a0 2021.\'a0\'a0Membrane-partitioned cell wall synthesis in mycobacteria.. Elife. 10\par \par Kavunja HW, Biegas KJ, Banahene N, Stewart JA, Piligian BF, Groenevelt JM, Sein CE, Morita YS, Niederweis M, M Siegrist S et al..\'a0 2020.\'a0\'a0Photoactivatable Glycolipid Probes for Identifying Mycolate-Protein Interactions in Live Mycobacteria.. J Am Chem Soc. 142(17):7725-7731.\par \par Koyasseril-Yehiya TM, Garc\'eda-Heredia A, Anson F, Rangadurai P, M Siegrist S, Thayumanavan S.\'a0 2020.\'a0\'a0Supramolecular antibiotics: a strategy for conversion of broad-spectrum to narrow-spectrum antibiotics for .. Nanoscale. 12(40):20693-20698.\par \par Fiolek TJ, Banahene N, Kavunja HW, Holmes NJ, Rylski AK, Pohane AArunrao, M Siegrist S, Swarts BM.\'a0 2019.\'a0\'a0Engineering the Mycomembrane of Live Mycobacteria with an Expanded Set of Trehalose Monomycolate Analogues.. Chembiochem. 20(10):1282-1291.\par \par Concepci\'f3n-Acevedo J, Miller JC, Boucher MJ, Klingbeil MM.\'a0 2018.\'a0\'a0Cell cycle localization dynamics of mitochondrial DNA polymerase IC in African trypanosomes.. Mol Biol Cell. 29(21):2540-2552.\par \par Rocha-Granados MC, Klingbeil MM.\'a0 2016.\'a0\'a0Leishmania DNA Replication Timing: A Stochastic Event? Trends Parasitol. 32(10):755-757.\par \par Malvankar NS, King GM, Lovley DR.\'a0 2015.\'a0\'a0Centimeter-long electron transport in marine sediments via conductive minerals.. ISME J. 9(2):527-31.\par \par Kim Y-T, Jung J-H, Stewart LC, Kwon S-W, Holden JF, Park C-S.\'a0 2015.\'a0\'a0Complete genome sequence of the hyperthermophilic methanogen Methanocaldococcus bathoardescens JH146(T) isolated from the basalt subseafloor.. Mar Genomics. 24 Pt 3:229-30.\par \par Wang DT, Gruen DS, Lollar BSherwood, Hinrichs K-U, Stewart LC, Holden JF, Hristov AN, Pohlman JW, Morrill PL, K\'f6nneke M et al..\'a0 2015.\'a0\'a0Methane cycling. Nonequilibrium clumped isotope signals in microbial methane.. Science. 348(6233):428-31.\par \par Stewart LC, Jung J-H, Kim Y-T, Kwon S-W, Park C-S, Holden JF.\'a0 2015.\'a0\'a0Methanocaldococcus bathoardescens sp. nov., a hyperthermophilic methanogen isolated from a volcanically active deep-sea hydrothermal vent.. Int J Syst Evol Microbiol. 65(Pt 4):1280-3.\par \par T\'fd? J, Klingbeil MM, Luke? J.\'a0 2015.\'a0\'a0Mitochondrial heat shock protein machinery hsp70/hsp40 is indispensable for proper mitochondrial DNA maintenance and replication.. MBio. 6(1)\par \par Diao Y, Rodriguez V, Klingbeil M, Arsuaga J.\'a0 2015.\'a0\'a0Orientation of DNA Minicircles Balances Density and Topological Complexity in Kinetoplast DNA.. PLoS One. 10(6):e0130998.\par \par Jung J-H, Kim Y-T, Jeon E-J, Seo D-H, Hensley SA, Holden JF, Lee J-H, Park C-S.\'a0 2014.\'a0\'a0Complete genome sequence of hyperthermophilic archaeon Thermococcus sp. ES1.. J Biotechnol. 174C:14-15.\par \par Arsuaga J, Diao Y, Klingbeil M, Rodriguez V.\'a0 2014.\'a0\'a0Properties of Topological Networks of Flexible Polygonal Chains.. Mol Based Math Biol. 2:98-106.\par \par Fukuda T, Matsumura T, Ato M, Hamasaki M, Nishiuchi Y, Murakami Y, Maeda Y, Yoshimori T, Matsumoto S, Kobayashi K et al..\'a0 2013.\'a0\'a0Critical roles for lipomannan and lipoarabinomannan in cell wall integrity of mycobacteria and pathogenesis of tuberculosis.. MBio. 4(1)\par \par Lee J-E, Kim I-H, Jung J-H, Seo D-H, Kang S-G, Holden JF, Cha J, Park C-S.\'a0 2013.\'a0\'a0Molecular cloning and enzymatic characterization of cyclomaltodextrinase from hyperthermophilic archaeon Thermococcus sp. CL1.. J Microbiol Biotechnol. 23(8):1060-9.\par \par Benmerzouga I, Concepci\'f3n-Acevedo J, Kim H-S, Vandoros AV, Cross GAM, Klingbeil MM, Li B.\'a0 2013.\'a0\'a0Trypanosoma brucei Orc1 is essential for nuclear DNA replication and affects both VSG silencing and VSG switching.. Mol Microbiol. 87(1):196-210.\par \par Burand JP, Kim W, Afonso CL, Tulman ER, Kutish GF, Lu Z, Rock DL.\'a0 2012.\'a0\'a0Analysis of the genome of the sexually transmitted insect virus Helicoverpa zea nudivirus 2.. Viruses. 4(1):28-61.\par \par Borglin S, Joyner D, Deangelis KM, Khudyakov J, D'haeseleer P, Joachimiak MP, Hazen T.\'a0 2012.\'a0\'a0Application of phenotypic microarrays to environmental microbiology.. Curr Opin Biotechnol. 23(1):41-8.\par \par Jung J-H, Lee J-H, Holden JF, Seo D-H, Shin H, Kim H-Y, Kim W, Ryu S, Park C-S.\'a0 2012.\'a0\'a0Complete genome sequence of the hyperthermophilic archaeon Pyrococcus sp. strain ST04, isolated from a deep-sea hydrothermal sulfide chimney on the Juan de Fuca Ridge.. J Bacteriol. 194(16):4434-5.\par \par Kuksin D, Norkin LC.\'a0 2012.\'a0\'a0Disassembly of simian virus 40 during passage through the endoplasmic reticulum and in the cytoplasm.. J Virol. 86(3):1555-62.\par \par Kuksin D, Norkin LC.\'a0 2012.\'a0\'a0Disassociation of the SV40 Genome from Capsid Proteins Prior to Nuclear Entry.. Virol J. 9(1):158.\par \par Concepci\'f3n-Acevedo J, Luo J, Klingbeil MM.\'a0 2012.\'a0\'a0Dynamic localization of Trypanosoma brucei mitochondrial DNA polymerase ID.. Eukaryot Cell. 11(7):844-55.\par \par Khudyakov JI, D'haeseleer P, Borglin SE, Deangelis KM, Woo H, Lindquist EA, Hazen TC, Simmons BA, Thelen MP.\'a0 2012.\'a0\'a0Global transcriptome response to ionic liquid by a tropical rain forest soil bacterium, Enterobacter lignolyticus.. Proc Natl Acad Sci U S A. 109(32):E2173-82.\par \par Gon S, Kumar K-N, N\'fcsslein K, Santore MM.\'a0 2012.\'a0\'a0How Bacteria Adhere to Brushy PEG Surfaces: Clinging to Flaws and Compressing the Brush.. Macromolecules. 45(20):8373-8381.\par \par Li Y, Kumar KN, Dabkowski JM, Corrigan M, Scott RW, N\'fcsslein K, Tew GN.\'a0 2012.\'a0\'a0New bactericidal surgical suture coating.. Langmuir. 28(33):12134-9.\par \par Krushkal J, Qu Y, Lovley DR, Adkins RM.\'a0 2012.\'a0\'a0Phylogenetic classification of diverse LysR-type transcriptional regulators of a model prokaryote Geobacter sulfurreducens.. J Mol Evol. 74(3-4):187-205.\par \par Swarts BM, Holsclaw CM, Jewett JC, Alber M, Fox DM, M Siegrist S, Leary JA, Kalscheuer R, Bertozzi CR.\'a0 2012.\'a0\'a0Probing the mycobacterial trehalome with bioorthogonal chemistry.. J Am Chem Soc. 134(39):16123-6.\par \par Fang B, Gon S, Park M-H, Kumar K-N, Rotello VM, N\'fcsslein K, Santore MM.\'a0 2012.\'a0\'a0Using flow to switch the valency of bacterial capture on engineered surfaces containing immobilized nanoparticles.. Langmuir. 28(20):7803-10.\par \par Fang B, Gon S, Park M, Kumar K-N, Rotello VM, Nusslein K, Santore MM.\'a0 2011.\'a0\'a0Bacterial adhesion on hybrid cationic nanoparticle-polymer brush surfaces: ionic strength tunes capture from monovalent to multivalent binding.. Colloids Surf B Biointerfaces. 87(1):109-15.\par \par Deangelis KM, D'haeseleer P, Chivian D, Fortney JL, Khudyakov J, Simmons B, Woo H, Arkin AP, Davenport K W, Goodwin L et al..\'a0 2011.\'a0\'a0Complete genome sequence of "Enterobacter lignolyticus" SCF1.. Stand Genomic Sci. 5(1):69-85.\par \par Krushkal J, Sontineni S, Leang C, Qu Y, Adkins RM, Lovley DR.\'a0 2011.\'a0\'a0Genome diversity of the TetR family of transcriptional regulators in a metal-reducing bacterial family Geobacteraceae and other microbial species.. OMICS. 15(7-8):495-506.\par \par Burand JP, Kim W, Welch A, Elkinton JS.\'a0 2011.\'a0\'a0Identification of a nucleopolyhedrovirus in winter moth populations from Massachusetts.. J Invertebr Pathol. 108(3):217-9.\par \par Nakatani F, Morita YS, Ashida H, Nagamune K, Maeda Y, Kinoshita T.\'a0 2011.\'a0\'a0Identification of a second catalytically active trans-sialidase in Trypanosoma brucei.. Biochem Biophys Res Commun. 415(2):421-5.\par \par Morita YS, Fukuda T, Sena CBC, Yamaryo-Botte Y, McConville MJ, Kinoshita T.\'a0 2011.\'a0\'a0Inositol lipid metabolism in mycobacteria: biosynthesis and regulatory mechanisms.. Biochim Biophys Acta. 1810(6):630-41.\par \par Springer AL, Bruhn DF, Kinzel KW, Rosenthal NF, Zukas R, Klingbeil MM.\'a0 2011.\'a0\'a0Silencing of a putative inner arm dynein heavy chain results in flagellar immotility in Trypanosoma brucei.. Mol Biochem Parasitol. 175(1):68-75.\par \par Marceau AH, Bahng S, Massoni SC, George NP, Sandler SJ, Marians KJ, Keck JL.\'a0 2011.\'a0\'a0Structure of the SSB-DNA polymerase III interface and its role in DNA replication.. EMBO J. 30(20):4236-47.\par \par Bruhn DF, Sammartino MP, Klingbeil MM.\'a0 2011.\'a0\'a0Three mitochondrial DNA polymerases are essential for kinetoplast DNA replication and survival of bloodstream form Trypanosoma brucei.. Eukaryot Cell. 10(6):734-43.\par \par Malvankar NS, Vargas M, Nevin KP, Franks AE, Leang C, Kim B-C, Inoue K, Mester T, Covalla SF, Johnson JP et al..\'a0 2011.\'a0\'a0Tunable metallic-like conductivity in microbial nanowire networks.. Nat Nanotechnol. 6(9):573-9.\par \par Sena CBC, Fukuda T, Miyanagi K, Matsumoto S, Kobayashi K, Murakami Y, Maeda Y, Kinoshita T, Morita YS.\'a0 2010.\'a0\'a0Controlled expression of branch-forming mannosyltransferase is critical for mycobacterial lipoarabinomannan biosynthesis.. J Biol Chem. 285(18):13326-36.\par \par Nagarajan H, Butler JE, Klimes A, Qiu Y, Zengler K, Ward J, Young ND, Meth\'e9 BA, Palsson B\'d8, Lovley DR et al..\'a0 2010.\'a0\'a0De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads.. PLoS One. 5(6):e10922.\par \par Aklujkar M, Young ND, Holmes D, Chavan M, Risso C, Kiss HE, Han CS, Land ML, Lovley DR.\'a0 2010.\'a0\'a0The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environments.. BMC Genomics. 11:490.\par \par Krushkal J, Ju\'e1rez K, Barbe JF, Qu Y, Andrade A, Puljic M, Adkins RM, Lovley DR, Ueki T.\'a0 2010.\'a0\'a0Genome-wide survey for PilR recognition sites of the metal-reducing prokaryote Geobacter sulfurreducens.. Gene. 469(1-2):31-44.\par \par Bruhn DF, Mozeleski B, Falkin L, Klingbeil MM.\'a0 2010.\'a0\'a0Mitochondrial DNA polymerase POLIB is essential for minicircle DNA replication in African trypanosomes.. Mol Microbiol. 75(6):1414-25.\par \par Klimes A, Franks AE, Glaven RH, Tran H, Barrett CL, Qiu Y, Zengler K, Lovley DR.\'a0 2010.\'a0\'a0Production of pilus-like filaments in Geobacter sulfurreducens in the absence of the type IV pilin protein PilA.. FEMS Microbiol Lett. 310(1):62-8.\par \par Inoue K, Qian X, Morgado L, Kim B-C, Mester T, Izallalen M, Salgueiro CA, Lovley DR.\'a0 2010.\'a0\'a0Purification and characterization of OmcZ, an outer-surface, octaheme c-type cytochrome essential for optimal current production by Geobacter sulfurreducens.. Appl Environ Microbiol. 76(12):3999-4007.\par \par Voordeckers JW, Kim B-C, Izallalen M, Lovley DR.\'a0 2010.\'a0\'a0Role of Geobacter sulfurreducens outer surface c-type cytochromes in reduction of soil humic acid and anthraquinone-2,6-disulfonate.. Appl Environ Microbiol. 76(7):2371-5.\par \par Kalasin S, Dabkowski J, N\'fcsslein K, Santore MM.\'a0 2010.\'a0\'a0The role of nano-scale heterogeneous electrostatic interactions in initial bacterial adhesion from flow: a case study with Staphylococcus aureus.. Colloids Surf B Biointerfaces. 76(2):489-95.\par \par Morita YS, Yamaryo-Botte Y, Miyanagi K, Callaghan JM, Patterson JH, Crellin PK, Coppel RL, Billman-Jacobe H, Kinoshita T, McConville MJ.\'a0 2010.\'a0\'a0Stress-induced synthesis of phosphatidylinositol 3-phosphate in mycobacteria.. J Biol Chem. 285(22):16643-50.\par \par Ver Eecke HC, Kelley DS, Holden JF.\'a0 2009.\'a0\'a0Abundances of hyperthermophilic autotrophic Fe(III) oxide reducers and heterotrophs in hydrothermal sulfide chimneys of the northeastern Pacific Ocean.. Appl Environ Microbiol. 75(1):242-5.\par \par Nevin KP, Kim B-C, Glaven RH, Johnson JP, Woodard TL, Meth\'e9 BA, Didonato RJ, Covalla SF, Franks AE, Liu A et al..\'a0 2009.\'a0\'a0Anode biofilm transcriptomics reveals outer surface components essential for high density current production in Geobacter sulfurreducens fuel cells.. PLoS One. 4(5):e5628.\par \par Lienkamp K, Madkour AE, Kumar K-N, N\'fcsslein K, Tew GN.\'a0 2009.\'a0\'a0Antimicrobial polymers prepared by ring-opening metathesis polymerization: manipulating antimicrobial properties by organic counterion and charge density variation.. Chemistry. 15(43):11715-22.\par \par Ishikawa E, Ishikawa T, Morita YS, Toyonaga K, Yamada H, Takeuchi O, Kinoshita T, Akira S, Yoshikai Y, Yamasaki S.\'a0 2009.\'a0\'a0Direct recognition of the mycobacterial glycolipid, trehalose dimycolate, by C-type lectin Mincle.. J Exp Med. 206(13):2879-88.\par \par Krushkal J, Leang C, Barbe JF, Qu Y, Yan B, Puljic M, Adkins RM, Lovley DR.\'a0 2009.\'a0\'a0Diversity of promoter elements in a Geobacter sulfurreducens mutant adapted to disruption in electron transfer.. Funct Integr Genomics. 9(1):15-25.\par \par Lienkamp K, Kumar K-N, Som A, N\'fcsslein K, Tew GN.\'a0 2009.\'a0\'a0"Doubly selective" antimicrobial polymers: how do they differentiate between bacteria? Chemistry. 15(43):11710-4.\par \par Junglen S, Kurth A, Kuehl H, Quan P-L, Ellerbrok H, Pauli G, Nitsche A, Nunn C, Rich SM, Lipkin WI et al..\'a0 2009.\'a0\'a0Examining landscape factors influencing relative distribution of mosquito genera and frequency of virus infection.. Ecohealth. 6(2):239-49.\par \par Aklujkar M, Krushkal J, DiBartolo G, Lapidus A, Land ML, Lovley DR.\'a0 2009.\'a0\'a0The genome sequence of Geobacter metallireducens: features of metabolism, physiology and regulation common and dissimilar to Geobacter sulfurreducens.. BMC Microbiol. 9:109.\par \par Risso C, Sun J, Zhuang K, Mahadevan R, DeBoy R, Ismail W, Shrivastava S, Huot H, Kothari S, Daugherty S et al..\'a0 2009.\'a0\'a0Genome-scale comparison and constraint-based metabolic reconstruction of the facultative anaerobic Fe(III)-reducer Rhodoferax ferrireducens.. BMC Genomics. 10:447.\par \par Leang C, Krushkal J, Ueki T, Puljic M, Sun J, Ju\'e1rez K, N\'fa\'f1ez C, Reguera G, DiDonato R, Postier B et al..\'a0 2009.\'a0\'a0Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens.. BMC Genomics. 10:331.\par \par Qu Y, Brown P, Barbe JF, Puljic M, Merino E, Adkins RM, Lovley DR, Krushkal J.\'a0 2009.\'a0\'a0GSEL version 2, an online genome-wide query system of operon organization and regulatory sequence elements of Geobacter sulfurreducens.. OMICS. 13(5):439-49.\par \par Ju\'e1rez K, Kim B-C, Nevin K, Olvera L, Reguera G, Lovley DR, Meth\'e9 BA.\'a0 2009.\'a0\'a0PilR, a transcriptional regulator for pilin and other genes required for Fe(III) reduction in Geobacter sulfurreducens.. J Mol Microbiol Biotechnol. 16(3-4):146-58.\par \par Yi H, Nevin KP, Kim B-C, Franks AE, Klimes A, Tender LM, Lovley DR.\'a0 2009.\'a0\'a0Selection of a variant of Geobacter sulfurreducens with enhanced capacity for current production in microbial fuel cells.. Biosens Bioelectron. 24(12):3498-503.\par \par Handa N, Amitani I, Gumlaw N, Sandler SJ, Kowalczykowski SC.\'a0 2009.\'a0\'a0Single molecule analysis of a red fluorescent RecA protein reveals a defect in nucleoprotein filament nucleation that relates to its reduced biological functions.. J Biol Chem. 284(28):18664-73.\par \par Griffith KL, Fitzpatrick MM, Keen EF, Wolf RE.\'a0 2009.\'a0\'a0Two functions of the C-terminal domain of Escherichia coli Rob: mediating "sequestration-dispersal" as a novel off-on switch for regulating Rob's activity as a transcription activator and preventing degradation of Rob by Lon protease.. J Mol Biol. 388(3):415-30.\par \par Garcia-Maruniak A, Abd-Alla AMM, Salem TZ, Parker AG, Lietze V-U, van Oers MM, Maruniak JE, Kim W, Burand JP, Cousserans F et al..\'a0 2009.\'a0\'a0Two viruses that cause salivary gland hypertrophy in Glossina pallidipes and Musca domestica are related and form a distinct phylogenetic clade.. J Gen Virol. 90(Pt 2):334-46.\par \par Klingbeil MM, Shapiro TA.\'a0 2009.\'a0\'a0Unraveling the secrets of regulating mitochondrial DNA replication.. Mol Cell. 35(4):398-400.\par \par Kashefi K, Moskowitz BM, Lovley DR.\'a0 2008.\'a0\'a0Characterization of extracellular minerals produced during dissimilatory Fe(III) and U(VI) reduction at 100 degrees C by Pyrobaculum islandicum.. Geobiology. 6(2):147-54.\par \par Mahadevan R, Yan B, Postier B, Nevin KP, Woodard TL, O'Neil R, Coppi MV, Meth\'e9 BA, Krushkal J.\'a0 2008.\'a0\'a0Characterizing regulation of metabolism in Geobacter sulfurreducens through genome-wide expression data and sequence analysis.. OMICS. 12(1):33-59.\par \par Tran HT, Krushkal J, Antommattei FM, Lovley DR, Weis RM.\'a0 2008.\'a0\'a0Comparative genomics of Geobacter chemotaxis genes reveals diverse signaling function.. BMC Genomics. 9:471.\par \par Kashefi K, Shelobolina ES, Elliott CW, Lovley DR.\'a0 2008.\'a0\'a0Growth of thermophilic and hyperthermophilic Fe(III)-reducing microorganisms on a ferruginous smectite as the sole electron acceptor.. Appl Environ Microbiol. 74(1):251-8.\par \par Kim B-C, Postier BL, Didonato RJ, Chaudhuri SK, Nevin KP, Lovley DR.\'a0 2008.\'a0\'a0Insights into genes involved in electricity generation in Geobacter sulfurreducens via whole genome microarray analysis of the OmcF-deficient mutant.. Bioelectrochemistry. 73(1):70-5.\par \par Kim B-C, Lovley DR.\'a0 2008.\'a0\'a0Investigation of direct vs. indirect involvement of the c-type cytochrome MacA in Fe(III) reduction by Geobacter sulfurreducens.. FEMS Microbiol Lett. 286(1):39-44.\par \par Crellin PK, Kovacevic S, Martin KL, Brammananth R, Morita YS, Billman-Jacobe H, McConville MJ, Coppel RL.\'a0 2008.\'a0\'a0Mutations in pimE restore lipoarabinomannan synthesis and growth in a Mycobacterium smegmatis lpqW mutant.. J Bacteriol. 190(10):3690-9.\par \par Chandler J, Vandoros AV, Mozeleski B, Klingbeil MM.\'a0 2008.\'a0\'a0Stem-loop silencing reveals that a third mitochondrial DNA polymerase, POLID, is required for kinetoplast DNA replication in trypanosomes.. Eukaryot Cell. 7(12):2141-6.\par \par Gomez-Alvarez V, King GM, N\'fcsslein K.\'a0 2007.\'a0\'a0Comparative bacterial diversity in recent Hawaiian volcanic deposits of different ages.. FEMS Microbiol Ecol. 60(1):60-73.\par \par Krushkal J, Yan B, DiDonato LN, Puljic M, Nevin KP, Woodard TL, Adkins RM, Meth\'e9 BA, Lovley DR.\'a0 2007.\'a0\'a0Genome-wide expression profiling in Geobacter sulfurreducens: identification of Fur and RpoS transcription regulatory sites in a relGsu mutant.. Funct Integr Genomics. 7(3):229-55.\par \par Yan B, Lovley DR, Krushkal J.\'a0 2007.\'a0\'a0Genome-wide similarity search for transcription factors and their binding sites in a metal-reducing prokaryote Geobacter sulfurreducens.. Biosystems. 90(2):421-41.\par \par Shelobolina ES, Nevin KP, Blakeney-Hayward JD, Johnsen CV, Plaia TW, Krader P, Woodard T, Holmes DE, Vanpraagh C G, Lovley DR.\'a0 2007.\'a0\'a0Geobacter pickeringii sp. nov., Geobacter argillaceus sp. nov. and Pelosinus fermentans gen. nov., sp. nov., isolated from subsurface kaolin lenses.. Int J Syst Evol Microbiol. 57(Pt 1):126-35.\par \par Lopper M, Boonsombat R, Sandler SJ, Keck JL.\'a0 2007.\'a0\'a0A hand-off mechanism for primosome assembly in replication restart.. Mol Cell. 26(6):781-93.\par \par Shelobolina ES, Coppi MV, Korenevsky AA, DiDonato LN, Sullivan SA, Konishi H, Xu H, Leang C, Butler JE, Kim B-C et al..\'a0 2007.\'a0\'a0Importance of c-Type cytochromes for U(VI) reduction by Geobacter sulfurreducens.. BMC Microbiol. 7:16.\par \par Coppi MV, O'Neil RA, Leang C, Kaufmann F, Meth\'e9 BA, Nevin KP, Woodard TL, Liu A, Lovley DR.\'a0 2007.\'a0\'a0Involvement of Geobacter sulfurreducens SfrAB in acetate metabolism rather than intracellular, respiration-linked Fe(III) citrate reduction.. Microbiology. 153(Pt 10):3572-85.\par \par Kaadige MR, Lopes JM.\'a0 2006.\'a0\'a0Analysis of Opi1p repressor mutants.. Curr Genet. 49(1):30-8.\par \par Yan B, N\'fa\'f1ez C, Ueki T, Esteve-N\'fa\'f1ez A, Puljic M, Adkins RM, Meth\'e9 BA, Lovley DR, Krushkal J.\'a0 2006.\'a0\'a0Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information.. Gene. 384:73-95.\par \par Khare T, Esteve-N\'fa\'f1ez A, Nevin KP, Zhu W, Yates JR, Lovley D, Giometti CS.\'a0 2006.\'a0\'a0Differential protein expression in the metal-reducing bacterium Geobacter sulfurreducens strain PCA grown with fumarate or ferric citrate.. Proteomics. 6(2):632-40.\par \par N\'fa\'f1ez C, Esteve-N\'fa\'f1ez A, Giometti C, Tollaksen S, Khare T, Lin W, Lovley DR, Meth\'e9 BA.\'a0 2006.\'a0\'a0DNA microarray and proteomic analyses of the RpoS regulon in Geobacter sulfurreducens.. J Bacteriol. 188(8):2792-800.\par \par Kovacevic S, Anderson D, Morita YS, Patterson J, Haites R, McMillan BNI, Coppel R, McConville MJ, Billman-Jacobe H.\'a0 2006.\'a0\'a0Identification of a novel protein with a role in lipoarabinomannan biosynthesis in mycobacteria.. J Biol Chem. 281(14):9011-7.\par \par Morita YS, Sena CBC, Waller RF, Kurokawa K, Sernee FM, Nakatani F, Haites RE, Billman-Jacobe H, McConville MJ, Maeda Y et al..\'a0 2006.\'a0\'a0PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of phosphatidylinositol mannoside in mycobacteria.. J Biol Chem. 281(35):25143-55.\par \par Ding Y-HR, Hixson KK, Giometti CS, Stanley A, Esteve-N\'fa\'f1ez A, Khare T, Tollaksen SL, Zhu W, Adkins JN, Lipton MS et al..\'a0 2006.\'a0\'a0The proteome of dissimilatory metal-reducing microorganism Geobacter sulfurreducens under various growth conditions.. Biochim Biophys Acta. 1764(7):1198-206.\par \par Hong Y, Nagamune K, Morita YS, Nakatani F, Ashida H, Maeda Y, Kinoshita T.\'a0 2006.\'a0\'a0Removal or maintenance of inositol-linked acyl chain in glycosylphosphatidylinositol is critical in trypanosome life cycle.. J Biol Chem. 281(17):11595-602.\par \par Hong Y, Nagamune K, Ohishi K, Morita YS, Ashida H, Maeda Y, Kinoshita T.\'a0 2006.\'a0\'a0TbGPI16 is an essential component of GPI transamidase in Trypanosoma brucei.. FEBS Lett. 580(2):603-6.\par \par Kim B-C, Qian X, Leang C, Coppi MV, Lovley DR.\'a0 2006.\'a0\'a0Two putative c-type multiheme cytochromes required for the expression of OmcB, an outer membrane protein essential for optimal Fe(III) reduction in Geobacter sulfurreducens.. J Bacteriol. 188(8):3138-42.\par \par Norkin LC, Kuksin D.\'a0 2005.\'a0\'a0The caveolae-mediated sv40 entry pathway bypasses the golgi complex en route to the endoplasmic reticulum.. Virol J. 2:38.\par \par Gardocki ME, Bakewell M, Kamath D, Robinson K, Borovicka K, Lopes JM.\'a0 2005.\'a0\'a0Genomic analysis of PIS1 gene expression.. Eukaryot Cell. 4(3):604-14.\par \par Burand JP, Tan W, Kim W, Nojima S, Roelofs W.\'a0 2005.\'a0\'a0Infection with the insect virus Hz-2v alters mating behavior and pheromone production in female Helicoverpa zea moths.. J Insect Sci. 5:6.\par \par Renzette N, Gumlaw N, Nordman JT, Krieger M, Yeh S-P, Long E, Centore R, Boonsombat R, Sandler SJ.\'a0 2005.\'a0\'a0Localization of RecA in Escherichia coli K-12 using RecA-GFP.. Mol Microbiol. 57(4):1074-85.\par \par Kim B-C, Leang C, Ding Y-HR, Glaven RH, Coppi MV, Lovley DR.\'a0 2005.\'a0\'a0OmcF, a putative c-Type monoheme outer membrane cytochrome required for the expression of other outer membrane cytochromes in Geobacter sulfurreducens.. J Bacteriol. 187(13):4505-13.\par \par Kang J Y, Hong Y, Ashida H, Shishioh N, Murakami Y, Morita YS, Maeda Y, Kinoshita T.\'a0 2005.\'a0\'a0PIG-V involved in transferring the second mannose in glycosylphosphatidylinositol.. J Biol Chem. 280(10):9489-97.\par \par Klingbeil MM, Englund PT.\'a0 2004.\'a0\'a0Closing the gaps in kinetoplast DNA network replication.. Proc Natl Acad Sci U S A. 101(13):4333-4.\par \par Yan B, Meth\'e9 BA, Lovley DR, Krushkal J.\'a0 2004.\'a0\'a0Computational prediction of conserved operons and phylogenetic footprinting of transcription regulatory elements in the metal-reducing bacterial family Geobacteraceae.. J Theor Biol. 230(1):133-44.\par \par de la Salmoni\'e8re Y-OLuc Goguet, Kim CC, Tsolaki AG, Pym AS, Siegrist MS, Small PM.\'a0 2004.\'a0\'a0High-throughput method for detecting genomic-deletion polymorphisms.. J Clin Microbiol. 42(7):2913-8.\par \par Butler JE, Kaufmann F, Coppi MV, N\'fa\'f1ez C, Lovley DR.\'a0 2004.\'a0\'a0MacA, a diheme c-type cytochrome involved in Fe(III) reduction by Geobacter sulfurreducens.. J Bacteriol. 186(12):4042-5.\par \par Zhang S, Kolvek S, Goodwin S, Lenz RW.\'a0 2004.\'a0\'a0Poly(hydroxyalkanoic acid) Biosynthesis in Ectothiorhodospirashaposhnikovii: Characterization and Reactivity of a Type III PHA Synthase.. Biomacromolecules. 5(1):40-8.\par \par Gov Y, Borovok I, Korem M, Singh VK, Jayaswal RK, Wilkinson BJ, Rich SM, Balaban N.\'a0 2004.\'a0\'a0Quorum sensing in Staphylococci is regulated via phosphorylation of three conserved histidine residues.. J Biol Chem. 279(15):14665-72.\par \par Vinogradov E, Korenevsky A, Lovley DR, Beveridge TJ.\'a0 2004.\'a0\'a0The structure of the core region of the lipopolysaccharide from Geobacter sulfurreducens.. Carbohydr Res. 339(18):2901-4.\par \par Tumwine JK, Kekitiinwa A, Nabukeera N, Akiyoshi DE, Rich SM, Widmer G, Feng X, Tzipori S.\'a0 2003.\'a0\'a0Cryptosporidium parvum in children with diarrhea in Mulago Hospital, Kampala, Uganda.. Am J Trop Med Hyg. 68(6):710-5.\par \par Kashefi K, Lovley DR.\'a0 2003.\'a0\'a0Extending the upper temperature limit for life.. Science. 301(5635):934.\par \par Meth\'e9 BA, Nelson KE, Eisen JA, Paulsen IT, Nelson W, Heidelberg JF, Wu D, Wu M, Ward N, Beanan MJ et al..\'a0 2003.\'a0\'a0Genome of Geobacter sulfurreducens: metal reduction in subsurface environments.. Science. 302(5652):1967-9.\par \par Zhang S, Kolvek S, Lenz RW, Goodwin S.\'a0 2003.\'a0\'a0Mechanism of the polymerization reaction initiated and catalyzed by the polyhydroxybutyrate synthase of Ralstonia eutropha.. Biomacromolecules. 4(3):504-9.\par \par Kaadige MR, Lopes JM.\'a0 2003.\'a0\'a0Opi1p, Ume6p and Sin3p control expression from the promoter of the INO2 regulatory gene via a novel regulatory cascade.. Mol Microbiol. 48(3):823-32.\par \par Ferreira MU, Ribeiro WL, Tonon AP, Kawamoto F, Rich SM.\'a0 2003.\'a0\'a0Sequence diversity and evolution of the malaria vaccine candidate merozoite surface protein-1 (MSP-1) of Plasmodium falciparum.. Gene. 304:65-75.\par \par Anderson RT, Vrionis HA, Ortiz-Bernad I, Resch CT, Long PE, Dayvault R, Karp K, Marutzky S, Metzler DR, Peacock A et al..\'a0 2003.\'a0\'a0Stimulating the in situ activity of Geobacter species to remove uranium from the groundwater of a uranium-contaminated aquifer.. Appl Environ Microbiol. 69(10):5884-91.\par \par Kashefi K, Holmes DE, Baross JA, Lovley DR.\'a0 2003.\'a0\'a0Thermophily in the Geobacteraceae: Geothermobacter ehrlichii gen. nov., sp. nov., a novel thermophilic member of the Geobacteraceae from the "Bag City" hydrothermal vent.. Appl Environ Microbiol. 69(5):2985-93.\par \par Saxowsky TT, Choudhary G, Klingbeil MM, Englund PT.\'a0 2003.\'a0\'a0Trypanosoma brucei has two distinct mitochondrial DNA polymerase beta enzymes.. J Biol Chem. 278(49):49095-101.\par \par Klapper L, McKnight DM, Fulton RJ, Blunt-Harris EL, Nevin KP, Lovley DR, Hatcher PG.\'a0 2002.\'a0\'a0Fulvic acid oxidation state detection using fluorescence spectroscopy.. Environ Sci Technol. 36(14):3170-5.\par \par Kashefi K, Tor JM, Holmes DE, Gaw Van Praagh CV, Reysenbach A-L, Lovley DR.\'a0 2002.\'a0\'a0Geoglobus ahangari gen. nov., sp. nov., a novel hyperthermophilic archaeon capable of oxidizing organic acids and growing autotrophically on hydrogen with Fe(III) serving as the sole electron acceptor.. Int J Syst Evol Microbiol. 52(Pt 3):719-28.\par \par Chapelle FH, O'Neill K, Bradley PM, Meth\'e9 BA, Ciufo SA, Knobel LRL, Lovley DR.\'a0 2002.\'a0\'a0A hydrogen-based subsurface microbial community dominated by methanogens.. Nature. 415(6869):312-5.\par \par Klingbeil MM, Motyka SA, Englund PT.\'a0 2002.\'a0\'a0Multiple mitochondrial DNA polymerases in Trypanosoma brucei.. Mol Cell. 10(1):175-86.\par \par Kashefi K, Holmes DE, Reysenbach A-L, Lovley DR.\'a0 2002.\'a0\'a0Use of Fe(III) as an electron acceptor to recover previously uncultured hyperthermophiles: isolation and characterization of Geothermobacterium ferrireducens gen. nov., sp. nov.. Appl Environ Microbiol. 68(4):1735-42.\par \par Tor JM, Kashefi K, Lovley DR.\'a0 2001.\'a0\'a0Acetate oxidation coupled to Fe(iii) reduction in hyperthermophilic microorganisms.. Appl Environ Microbiol. 67(3):1363-5.\par \par Zhang S, Kamachi M, Takagi Y, Lenz RW, Goodwin S.\'a0 2001.\'a0\'a0Comparative study of the relationship between monomer structure and reactivity for two polyhydroxyalkanoate synthases.. Appl Microbiol Biotechnol. 56(1-2):131-6.\par \par Craig SA, Holden JF, Khaled MY.\'a0 2001.\'a0\'a0Determination of polydextrose in foods by ion chromatography: collaborative study.. J AOAC Int. 84(2):472-8.\par \par Kaufmann F, Lovley DR.\'a0 2001.\'a0\'a0Isolation and characterization of a soluble NADPH-dependent Fe(III) reductase from Geobacter sulfurreducens.. J Bacteriol. 183(15):4468-76.\par \par Adams MW, Holden JF, Menon AL, Schut GJ, Grunden AM, Hou C, Hutchins AM, Jenney FE, Kim C, Ma K et al..\'a0 2001.\'a0\'a0Key role for sulfur in peptide metabolism and in regulation of three hydrogenases in the hyperthermophilic archaeon Pyrococcus furiosus.. J Bacteriol. 183(2):716-24.\par \par Kashefi K, Tor JM, Nevin KP, Lovley DR.\'a0 2001.\'a0\'a0Reductive precipitation of gold by dissimilatory Fe(III)-reducing bacteria and archaea.. Appl Environ Microbiol. 67(7):3275-9.\par \par Morris JC, Drew ME, Klingbeil MM, Motyka SA, Saxowsky TT, Wang Z, Englund PT.\'a0 2001.\'a0\'a0Replication of kinetoplast DNA: an update for the new millennium.. Int J Parasitol. 31(5-6):453-8.\par \par Klingbeil MM, Drew ME, Liu Y, Morris JC, Motyka SA, Saxowsky TT, Wang Z, Englund PT.\'a0 2001.\'a0\'a0Unlocking the secrets of trypanosome kinetoplast DNA network replication.. Protist. 152(4):255-62.\par \par Elkhaimi M, Kaadige MR, Kamath D, Jackson JC, Biliran H, Lopes JM.\'a0 2000.\'a0\'a0Combinatorial regulation of phospholipid biosynthetic gene expression by the UME6, SIN3 and RPD3 genes.. Nucleic Acids Res. 28(16):3160-7.\par \par Craig SA, Holden JF, Khaled MY, Craig SA, Holden JF, Khaled MY.\'a0 2000.\'a0\'a0Determination of polydextrose as dietary fiber in foods.. J AOAC Int. 83(4):1006-12.\par \par Feng X, Rich SM, Akiyoshi D, Tumwine JK, Kekitiinwa A, Nabukeera N, Tzipori S, Widmer G.\'a0 2000.\'a0\'a0Extensive polymorphism in Cryptosporidium parvum identified by multilocus microsatellite analysis.. Appl Environ Microbiol. 66(8):3344-9.\par \par Cox MM, Goodman MF, Kreuzer KN, Sherratt DJ, Sandler SJ, Marians KJ.\'a0 2000.\'a0\'a0The importance of repairing stalled replication forks.. Nature. 404(6773):37-41.\par \par Robinson KA, Koepke JI, Kharodawala M, Lopes JM.\'a0 2000.\'a0\'a0A network of yeast basic helix-loop-helix interactions.. Nucleic Acids Res. 28(22):4460-6.\par \par Kashefi K, Lovley DR.\'a0 2000.\'a0\'a0Reduction of Fe(III), Mn(IV), and toxic metals at 100 degrees C by Pyrobaculum islandicum.. Appl Environ Microbiol. 66(3):1050-6.\par \par Vargas M, Kashefi K, Blunt-Harris EL, Lovley DR.\'a0 1998.\'a0\'a0Microbiological evidence for Fe(III) reduction on early Earth.. Nature. 395(6697):65-7.\par \par Seitz EM, Brockman JP, Sandler SJ, Clark AJ, Kowalczykowski SC.\'a0 1998.\'a0\'a0RadA protein is an archaeal RecA protein homolog that catalyzes DNA strand exchange.. Genes Dev. 12(9):1248-53.\par \par Klingbeil MM, Walker DJ, Huang YJ, Komuniecki R.\'a0 1997.\'a0\'a0Altered phosphorylation/inactivation of a novel pyruvate dehydrogenase in adult Ascaris suum muscle.. Mol Biochem Parasitol. 90(1):323-6.\par \par Newman DK, Kennedy EK, Coates JD, Ahmann D, Ellis DJ, Lovley DR, Morel FM.\'a0 1997.\'a0\'a0Dissimilatory arsenate and sulfate reduction in Desulfotomaculum auripigmentum sp. nov.. Arch Microbiol. 168(5):380-8.\par \par Brendel V, Brocchieri L, Sandler SJ, Clark AJ, Karlin S.\'a0 1997.\'a0\'a0Evolutionary comparisons of RecA-like proteins across all major kingdoms of living organisms.. J Mol Evol. 44(5):528-41.\par \par Klingbeil MM, Walker DJ, Arnette R, Sidawy E, Hayton K, Komuniecki PR, Komuniecki R.\'a0 1996.\'a0\'a0Identification of a novel dihydrolipoyl dehydrogenase-binding protein in the pyruvate dehydrogenase complex of the anaerobic parasitic nematode, Ascaris suum.. J Biol Chem. 271(10):5451-7.\par \par Caporale DA, Rich SM, Spielman A, Telford SR, Kocher TD.\'a0 1995.\'a0\'a0Discriminating between Ixodes ticks by means of mitochondrial DNA sequences.. Mol Phylogenet Evol. 4(4):361-5.\par \par Rich SM, Caporale DA, Telford SR, Kocher TD, Hartl DL, Spielman A.\'a0 1995.\'a0\'a0Distribution of the Ixodes ricinus-like ticks of eastern North America.. Proc Natl Acad Sci U S A. 92(14):6284-8.\par \par Duran E, Komuniecki RW, Komuniecki PR, Wheelock MJ, Klingbeil MM, Ma YC, Johnson KR.\'a0 1993.\'a0\'a0Characterization of cDNA clones for the 2-methyl branched-chain enoyl-CoA reductase. An enzyme involved in branched-chain fatty acid synthesis in anaerobic mitochondria of the parasitic nematode Ascaris suum.. J Biol Chem. 268(30):22391-6.\par \par Rand PW, Lacombe EH, Smith RP, Rich SM, Kilpatrick CW, Dragoni CA, Caporale D.\'a0 1993.\'a0\'a0Competence of Peromyscus maniculatus (Rodentia: Cricetidae) as a reservoir host for Borrelia burgdorferi (Spirochaetares: Spirochaetaceae) in the wild.. J Med Entomol. 30(3):614-8.\par \par King GM, Klug MJ, Lovley DR.\'a0 1983.\'a0\'a0Metabolism of acetate, methanol, and methylated amines in intertidal sediments of lowes cove, maine.. Appl Environ Microbiol. 45(6):1848-53.\par \par Lovley DR, Klug MJ.\'a0 1983.\'a0\'a0Methanogenesis from methanol and methylamines and acetogenesis from hydrogen and carbon dioxide in the sediments of a eutrophic lake.. Appl Environ Microbiol. 45(4):1310-5.\par \par Lovley DR, Klug MJ.\'a0 1983.\'a0\'a0Sulfate reducers can outcompete methanogens at freshwater sulfate concentrations.. Appl Environ Microbiol. 45(1):187-92.\par \par Lovley DR, Klug MJ.\'a0 1982.\'a0\'a0Intermediary metabolism of organic matter in the sediments of a eutrophic lake.. Appl Environ Microbiol. 43(3):552-60.\par \par Lovley DR, Dwyer DF, Klug MJ.\'a0 1982.\'a0\'a0Kinetic analysis of competition between sulfate reducers and methanogens for hydrogen in sediments.. Appl Environ Microbiol. 43(6):1373-9.\par \par Kreuzer W.\'a0 1975.\'a0\'a0Ecological observation of the 137Cs-contamination in beef of animals from the southern-Bavarian area.. Environ Qual Saf. 4:24-36.\par \par Kahn T, Bosch J, Levitt MF, Goldstein MH.\'a0 1975.\'a0\'a0Effect of sodium nitrate loading on electrolyte transport by the renal tubule.. Am J Physiol. 229(3):746-53.\par \par Koenigs JW.\'a0 1975.\'a0\'a0Hydrogen peroxide and iron: a microbial cellulolytic system? Biotechnol Bioeng Symp. (5):151-9.\par \par Kr\'f6ger H, Donner I, Skiello G.\'a0 1975.\'a0\'a0Influence of a new virostatic compound on the induction of enzymes in rat liver.. Arzneimittelforschung. 25(9):1426-9.\par \par Sinelnikova EM, Dvoretskova TV, Kagan ZS.\'a0 1975.\'a0\'a0[Intermediate plateaux in kinetics of the reaction catalyzed by biodegradative L-threonine dehydratase from Escherichia coli].. Biokhimiia. 40(3):645-51.\par \par Scherberger RR, Kaess H, Br\'fcckner S.\'a0 1975.\'a0\'a0[Studies on the action of an anticholinergic agent in combination with a tranquilizer on gastric juice secretion in man].. Arzneimittelforschung. 25(9):1460-3.\par \par Kuznetsov ON, Litsov AN.\'a0 1973.\'a0\'a0[Psychoneurological problems of human adaptation to changed daily schedules].. Kosm Biol Med. 7(4):69-75.\par \par }