Szmuc E, Walker DJF, Kireev D, Akinwande D, Lovley DR, Keitz B, Ellington A.  2023.  Engineering Geobacter pili to produce metal:organic filaments.. Biosens Bioelectron. 222:114993.

Rivera SL, Espaillat A, Aditham AK, Shieh P, Muriel-Mundo C, Kim J, Cava F, M Siegrist S.  2021.  Chemically Induced Cell Wall Stapling in Bacteria.. Cell Chem Biol. 28(2):213-220.e4.

Sun Y-L, Montz BJ, Selhorst R, Tang H-Y, Zhu J, Nevin KP, Woodard TL, Ribbe AE, Russell TP, Nonnenmann SS et al..  2021.  Solvent-Induced Assembly of Microbial Protein Nanowires into Superstructured Bundles.. Biomacromolecules. 22(3):1305-1311.

Sun Y-L, Tang H-Y, Ribbe A, Duzhko V, Woodard TL, Ward JE, Bai Y, Nevin KP, Nonnenmann SS, Russell T et al..  2018.  Conductive Composite Materials Fabricated from Microbially Produced Protein Nanowires.. Small. 14(44):e1802624.

M Siegrist S, Aditham AK, Espaillat A, Cameron TA, Whiteside SA, Cava F, Portnoy DA, Bertozzi CR.  2015.  Host Actin Polymerization Tunes the Cell Division Cycle of an Intracellular Pathogen.. Cell Rep. 

Malvankar NS, Vargas M, Nevin K, Tremblay P-L, Evans-Lutterodt K, Nykypanchuk D, Martz E, Tuominen MT, Lovley DR.  2015.  Structural basis for metallic-like conductivity in microbial nanowires.. mBio. 6(2):e00084.

Shrestha PMalla, Malvankar NS, Werner JJ, Franks AE, Elena-Rotaru A, Shrestha M, Liu F, Nevin KP, Angenent LT, Lovley DR.  2014.  Correlation between microbial community and granule conductivity in anaerobic bioreactors for brewery wastewater treatment.. Bioresour Technol. 174:306-10.

Shanmugam R, Aklujkar M, Schäfer M, Reinhardt R, Nickel O, Reuter G, Lovley DR, Ehrenhofer-Murray A, Nellen W, Ankri S et al..  2014.  The Dnmt2 RNA methyltransferase homolog of Geobacter sulfurreducens specifically methylates tRNA-Glu.. Nucleic Acids Res. 42(10):6487-96.

T Lin J, Breves EA, Dyar MD, Eecke HCVer, Jamieson JW, Holden JF.  2014.  Magnetite formation from ferrihydrite by hyperthermophilic archaea from Endeavour Segment, Juan de Fuca Ridge hydrothermal vent chimneys.. Geobiology. 12(3):200-11.

Nagarajan H, Embree M, Rotaru A-E, Shrestha PM, Feist AM, Palsson BØ, Lovley DR, Zengler K.  2013.  Characterization and modelling of interspecies electron transfer mechanisms and microbial community dynamics of a syntrophic association.. Nat Commun. 4:2809.

Nagarajan H, Sahin M, Nogales J, Latif H, Lovley DR, Ebrahim A, Zengler K.  2013.  Characterizing acetogenic metabolism using a genome-scale metabolic reconstruction of Clostridium ljungdahlii.. Microb Cell Fact. 12:118.

Qiu Y, Nagarajan H, Embree M, Shieu W, Abate E, Juárez K, Cho B-K, Elkins JG, Nevin KP, Barrett CL et al..  2013.  Characterizing the interplay between multiple levels of organization within bacterial sigma factor regulatory networks.. Nat Commun. 4:1755.

McKeever R, Sheppard D, Nüsslein K, Baek K-H, Rieber K, Ergas SJ, Forbes R, Hilyard M, Park C.  2012.  Biodegradation of ethylene dibromide (1,2-dibromoethane [EDB]) in microcosms simulating in situ and biostimulated conditions.. J Hazard Mater. 209-210:92-8.

Blanco M B, Elfawal MA, Durden LA, Beati L, Xu G, Godfrey LR, Rich SM.  2012.  Genetic diversity of ixodid ticks parasitizing eastern mouse and dwarf lemurs in Madagascar, with descriptions of the larva, nymph and male of Ixodes lemuris (Acari: Ixodidae).. J Parasitol. 

Ver Eecke HC, Butterfield DA, Huber JA, Lilley MD, Olson EJ, Roe KK, Evans LJ, Merkel AY, Cantin HV, Holden JF.  2012.  Hydrogen-limited growth of hyperthermophilic methanogens at deep-sea hydrothermal vents.. Proc Natl Acad Sci U S A. 109(34):13674-9.

Baek K, McKeever R, Rieber K, Sheppard D, Park C, Ergas SJ, Nüsslein K.  2012.  Molecular approach to evaluate biostimulation of 1,2-dibromoethane in contaminated groundwater.. Bioresour Technol. 123C:207-213.

Boles AR, Conneely T, McKeever R, Nixon P, Nüsslein KR, Ergas SJ.  2012.  Performance of a pilot-scale packed bed reactor for perchlorate reduction using a sulfur oxidizing bacterial consortium.. Biotechnol Bioeng. 109(3):637-46.

Burand JP, Kim W, Welch A, Elkinton JS.  2011.  Identification of a nucleopolyhedrovirus in winter moth populations from Massachusetts.. J Invertebr Pathol. 108(3):217-9.

Callister SJ, Wilkins MJ, Nicora CD, Williams KH, Banfield JF, VerBerkmoes NC, Hettich RL, N'Guessan L, Mouser PJ, Elifantz H et al..  2010.  Analysis of biostimulated microbial communities from two field experiments reveals temporal and spatial differences in proteome profiles.. Environ Sci Technol. 44(23):8897-903.

Ashkenazy H, Erez E, Martz E, Pupko T, Ben-Tal N.  2010.  ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids.. Nucleic Acids Res. 38(Web Server issue):W529-33.

Williams KH, Nevin KP, Franks A, Englert A, Long PE, Lovley DR.  2010.  Electrode-based approach for monitoring in situ microbial activity during subsurface bioremediation.. Environ Sci Technol. 44(1):47-54.

Elifantz H, N'guessan LA, Mouser PJ, Williams KH, Wilkins MJ, Risso C, Holmes DE, Long PE, Lovley DR.  2010.  Expression of acetate permease-like (apl ) genes in subsurface communities of Geobacter species under fluctuating acetate concentrations.. FEMS Microbiol Ecol. 73(3):441-9.

N'guessan LA, Elifantz H, Nevin KP, Mouser PJ, Methé B, Woodard TL, Manley K, Williams KH, Wilkins MJ, Larsen JT et al..  2010.  Molecular analysis of phosphate limitation in Geobacteraceae during the bioremediation of a uranium-contaminated aquifer.. ISME J. 4(2):253-66.

Sahu AK, Conneely T, Nüsslein KR, Ergas SJ.  2009.  Biological perchlorate reduction in packed bed reactors using elemental sulfur.. Environ Sci Technol. 43(12):4466-71.

Gabriel GJ, Maegerlein JA, Nelson CF, Dabkowski JM, Eren T, Nüsslein K, Tew GN.  2009.  Comparison of facially amphiphilic versus segregated monomers in the design of antibacterial copolymers.. Chemistry. 15(2):433-9.

Li X, Thomas BN, Rich SM, Ecker D, Tumwine JK, Foulkes AS.  2009.  Estimating and testing haplotype-trait associations in non-diploid populations.. J R Stat Soc Ser C Appl Stat. 58(5):663-678.

Junglen S, Kurth A, Kuehl H, Quan P-L, Ellerbrok H, Pauli G, Nitsche A, Nunn C, Rich SM, Lipkin WI et al..  2009.  Examining landscape factors influencing relative distribution of mosquito genera and frequency of virus infection.. Ecohealth. 6(2):239-49.

Sahu AK, Conneely T, Nüsslein K, Ergas SJ.  2009.  Hydrogenotrophic denitrification and perchlorate reduction in ion exchange brines using membrane biofilm reactors.. Biotechnol Bioeng. 104(3):483-91.

Mouser PJ, N'guessan LA, Elifantz H, Holmes DE, Williams KH, Wilkins MJ, Long PE, Lovley DR.  2009.  Influence of heterogeneous ammonium availability on bacterial community structure and the expression of nitrogen fixation and ammonium transporter genes during in situ bioremediation of uranium-contaminated groundwater.. Environ Sci Technol. 43(12):4386-92.

Wilkins MJ, VerBerkmoes NC, Williams KH, Callister SJ, Mouser PJ, Elifantz H, N'guessan LA, Thomas BC, Nicora CD, Shah MB et al..  2009.  Proteogenomic monitoring of Geobacter physiology during stimulated uranium bioremediation.. Appl Environ Microbiol. 75(20):6591-9.

Esteve-Núñez A, Sosnik J, Visconti P, Lovley DR.  2008.  Fluorescent properties of c-type cytochromes reveal their potential role as an extracytoplasmic electron sink in Geobacter sulfurreducens.. Environ Microbiol. 10(2):497-505.

Kashefi K, Shelobolina ES, Elliott CW, Lovley DR.  2008.  Growth of thermophilic and hyperthermophilic Fe(III)-reducing microorganisms on a ferruginous smectite as the sole electron acceptor.. Appl Environ Microbiol. 74(1):251-8.

Risso C, Methé BA, Elifantz H, Holmes DE, Lovley DR.  2008.  Highly conserved genes in Geobacter species with expression patterns indicative of acetate limitation.. Microbiology. 154(Pt 9):2589-99.

Mayrose I, Penn O, Erez E, Rubinstein ND, Shlomi T, Freund N T, Bublil EM, Ruppin E, Sharan R, Gershoni JM et al..  2007.  Pepitope: epitope mapping from affinity-selected peptides.. Bioinformatics. 23(23):3244-6.

Stern A, Doron-Faigenboim A, Erez E, Martz E, Bacharach E, Pupko T.  2007.  Selecton 2007: advanced models for detecting positive and purifying selection using a Bayesian inference approach.. Nucleic Acids Res. 35(Web Server issue):W506-11.

Mahadevan R, Bond DR, Butler JE, Esteve-Nuñez A, Coppi MV, Palsson BO, Schilling CH, Lovley DR.  2006.  Characterization of metabolism in the Fe(III)-reducing organism Geobacter sulfurreducens by constraint-based modeling.. Appl Environ Microbiol. 72(2):1558-68.

Yan B, Núñez C, Ueki T, Esteve-Núñez A, Puljic M, Adkins RM, Methé BA, Lovley DR, Krushkal J.  2006.  Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information.. Gene. 384:73-95.

Khare T, Esteve-Núñez A, Nevin KP, Zhu W, Yates JR, Lovley D, Giometti CS.  2006.  Differential protein expression in the metal-reducing bacterium Geobacter sulfurreducens strain PCA grown with fumarate or ferric citrate.. Proteomics. 6(2):632-40.

Núñez C, Esteve-Núñez A, Giometti C, Tollaksen S, Khare T, Lin W, Lovley DR, Methé BA.  2006.  DNA microarray and proteomic analyses of the RpoS regulon in Geobacter sulfurreducens.. J Bacteriol. 188(8):2792-800.

Butler JE, Glaven RH, Esteve-Núñez A, Núñez C, Shelobolina ES, Bond DR, Lovley DR.  2006.  Genetic characterization of a single bifunctional enzyme for fumarate reduction and succinate oxidation in Geobacter sulfurreducens and engineering of fumarate reduction in Geobacter metallireducens.. J Bacteriol. 188(2):450-5.

Ding Y-HR, Hixson KK, Giometti CS, Stanley A, Esteve-Núñez A, Khare T, Tollaksen SL, Zhu W, Adkins JN, Lipton MS et al..  2006.  The proteome of dissimilatory metal-reducing microorganism Geobacter sulfurreducens under various growth conditions.. Biochim Biophys Acta. 1764(7):1198-206.

DiDonato LN, Sullivan SA, Methé BA, Nevin KP, England R, Lovley DR.  2006.  Role of RelGsu in stress response and Fe(III) reduction in Geobacter sulfurreducens.. J Bacteriol. 188(24):8469-78.

Klingbeil MM, Englund PT.  2004.  Closing the gaps in kinetoplast DNA network replication.. Proc Natl Acad Sci U S A. 101(13):4333-4.

Chin K-J, Esteve-Núñez A, Leang C, Lovley DR.  2004.  Direct correlation between rates of anaerobic respiration and levels of mRNA for key respiratory genes in Geobacter sulfurreducens.. Appl Environ Microbiol. 70(9):5183-9.

Esteve-Núñez A, Núñez C, Lovley DR.  2004.  Preferential reduction of FeIII over fumarate by Geobacter sulfurreducens.. J Bacteriol. 186(9):2897-9.

Methé BA, Nelson KE, Eisen JA, Paulsen IT, Nelson W, Heidelberg JF, Wu D, Wu M, Ward N, Beanan MJ et al..  2003.  Genome of Geobacter sulfurreducens: metal reduction in subsurface environments.. Science. 302(5652):1967-9.

Lim H, Eng J, Yates JR, Tollaksen SL, Giometti CS, Holden JF, Adams MWW, Reich CI, Olsen GJ, Hays LG.  2003.  Identification of 2D-gel proteins: a comparison of MALDI/TOF peptide mass mapping to mu LC-ESI tandem mass spectrometry.. J Am Soc Mass Spectrom. 14(9):957-70.

Saxowsky TT, Choudhary G, Klingbeil MM, Englund PT.  2003.  Trypanosoma brucei has two distinct mitochondrial DNA polymerase beta enzymes.. J Biol Chem. 278(49):49095-101.

Burke WD, Malik HS, Rich SM, Eickbush TH.  2002.  Ancient lineages of non-LTR retrotransposons in the primitive eukaryote, Giardia lamblia.. Mol Biol Evol. 19(5):619-30.

Klingbeil MM, Motyka SA, Englund PT.  2002.  Multiple mitochondrial DNA polymerases in Trypanosoma brucei.. Mol Cell. 10(1):175-86.

Morris JC, Drew ME, Klingbeil MM, Motyka SA, Saxowsky TT, Wang Z, Englund PT.  2001.  Replication of kinetoplast DNA: an update for the new millennium.. Int J Parasitol. 31(5-6):453-8.

Klingbeil MM, Drew ME, Liu Y, Morris JC, Motyka SA, Saxowsky TT, Wang Z, Englund PT.  2001.  Unlocking the secrets of trypanosome kinetoplast DNA network replication.. Protist. 152(4):255-62.

Elkhaimi M, Kaadige MR, Kamath D, Jackson JC, Biliran H, Lopes JM.  2000.  Combinatorial regulation of phospholipid biosynthetic gene expression by the UME6, SIN3 and RPD3 genes.. Nucleic Acids Res. 28(16):3160-7.

Ayala FJ, Escalante AA, Rich SM.  1999.  Evolution of Plasmodium and the recent origin of the world populations of Plasmodium falciparum.. Parassitologia. 41(1-3):55-68.

Coates JD, Ellis DJ, Gaw CV, Lovley DR.  1999.  Geothrix fermentans gen. nov., sp. nov., a novel Fe(III)-reducing bacterium from a hydrocarbon-contaminated aquifer.. Int J Syst Bacteriol. 49 Pt 4:1615-22.

Stolz JF, Ellis DJ, Blum JS, Ahmann D, Lovley DR, Oremland RS.  1999.  Sulfurospirillum barnesii sp. nov. and Sulfurospirillum arsenophilum sp. nov., new members of the Sulfurospirillum clade of the epsilon Proteobacteria.. Int J Syst Bacteriol. 49 Pt 3:1177-80.

Coates JD, Councell T, Ellis DJ, Lovley DR.  1998.  Carbohydrate oxidation coupled to Fe(III) reduction, a novel form of anaerobic metabolism.. Anaerobe. 4(6):277-82.

Coates JD, Ellis DJ, Blunt-Harris EL, Gaw CV, Roden EE, Lovley DR.  1998.  Recovery of humic-reducing bacteria from a diversity of environments.. Appl Environ Microbiol. 64(4):1504-9.

Newman DK, Kennedy EK, Coates JD, Ahmann D, Ellis DJ, Lovley DR, Morel FM.  1997.  Dissimilatory arsenate and sulfate reduction in Desulfotomaculum auripigmentum sp. nov.. Arch Microbiol. 168(5):380-8.

Ali SS, Elliott WH.  1975.  Bile acids. XLVII. 12alpha-Hydroxylation of precursors of allo bile acids by rabbit liver microsomes.. Biochim Biophys Acta. 409(2):249-57.